RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 STACQ99469 402 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 ZNF559Q9BR84 538 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 SPRTNQ9H040 489 aaPredicted RBP9.54□□□□□ -0.88
LIMA1-201ENST00000341247 LMAN1LQ9HAT1 526 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 KLHL1Q9NR64 748 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 MRPS18AQ9NVS2 196 aaKnown RBP9.54□□□□□ -0.88
LIMA1-201ENST00000341247 ADAM18Q9Y3Q7 739 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 PSMD9O00233 223 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 STK25O00506 426 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 RNH1P13489 461 aaKnown RBP9.54□□□□□ -0.88
LIMA1-201ENST00000341247 S1PR1P21453 382 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 RPS4Y1P22090 263 aaKnown RBP9.54□□□□□ -0.88
LIMA1-201ENST00000341247 OR1D4P47884 311 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 E2F1Q01094 437 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 IDNKQ5T6J7 187 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 RNLSQ5VYX0 342 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 KIRREL2Q6UWL6 708 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 ZNF321PQ8N8H1 164 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 FAM98AQ8NCA5 519 aaKnown RBP9.54□□□□□ -0.88
LIMA1-201ENST00000341247 OR52E2Q8NGJ4 325 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 OR13C5Q8NGS8 318 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 ZNF649Q9BS31 505 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 PNO1Q9NRX1 252 aaKnown RBP9.54□□□□□ -0.88
LIMA1-201ENST00000341247 RPS6KB2Q9UBS0 482 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 RIIAD1A6NNX1 92 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 C10orf142B7Z368 130 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 PROS1P07225 676 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 IL9P15248 144 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 RPL4P36578 427 aaKnown RBP9.54□□□□□ -0.88
LIMA1-201ENST00000341247 FOXL2P58012 376 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 OR12D2P58182 307 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 RSBN1Q5VWQ0 802 aaPredicted RBP9.54□□□□□ -0.88
LIMA1-201ENST00000341247 VASNQ6EMK4 673 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 POMZP3Q6PJE2 187 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 PRR22Q8IZ63 422 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 ZNF485Q8NCK3 441 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 C16orf52Q8NHV5 167 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.54□□□□□ -0.88
LIMA1-201ENST00000341247 DMRTB1Q96MA1 342 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 TEAD3Q99594 435 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 SATB2Q9UPW6 733 aa9.54□□□□□ -0.88
LIMA1-201ENST00000341247 IGHV5-51A0A0C4DH38 117 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 IQCMA0A1B0GVH7 501 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 CDC14CA4D256 554 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 C4orf47A7E2U8 309 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 FAM25AB3EWG3 89 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 FAM25CB3EWG5 89 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 FAM25GB3EWG6 89 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 CCNKO75909 580 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 NKX2-2O95096 273 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 RCBTB2O95199 551 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 HLA-DPB1P04440 258 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 GRPRP30550 384 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 ETV6P41212 452 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 MLLT3P42568 568 aaPredicted RBP9.53□□□□□ -0.88
LIMA1-201ENST00000341247 FZD5Q13467 585 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 IL18Q14116 193 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 CNIH2Q6PI25 160 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 LYPD4Q6UWN0 246 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 SYT9Q86SS6 491 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 C10orf53Q8N6V4 93 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 BRIX1Q8TDN6 353 aaKnown RBP9.53□□□□□ -0.88
LIMA1-201ENST00000341247 CCDC32Q9BV29 185 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 BEX2Q9BXY8 128 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 PPIL3Q9H2H8 161 aaKnown RBP9.53□□□□□ -0.88
LIMA1-201ENST00000341247 TTYH1Q9H313 450 aaPredicted RBP9.53□□□□□ -0.88
LIMA1-201ENST00000341247 DNAJB12Q9NXW2 375 aaKnown RBP9.53□□□□□ -0.88
LIMA1-201ENST00000341247 MTCH2Q9Y6C9 303 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 CFAP47Q6ZTR5 3102 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 A0A0B4J2E0 115 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 A0A1B0GX12 115 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 C17orf51A8MQB3 221 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 CSF3P09919 207 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 CHRNB1P11230 501 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 SHC1P29353 583 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 PYCR1P32322 319 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 CASP3P42574 277 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 RFX2P48378 723 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 BLKP51451 505 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 KCNJ8Q15842 424 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 TMEM91Q6ZNR0 172 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 SSX6Q7RTT6 188 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 C4orf36Q96KX1 117 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 RP1P56715 2156 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 A0A1W2PRG6 482 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 COQ9O75208 318 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 CSTAP01040 98 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 ACAA2P42765 397 aaKnown RBP9.53□□□□□ -0.88
LIMA1-201ENST00000341247 OR10A3P58181 314 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 TP53I3Q53FA7 332 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 LNX2Q8N448 690 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 C17orf47Q8NEP4 570 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 IL17RDQ8NFM7 739 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 OR5M3Q8NGP4 307 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 FOXQ1Q9C009 403 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 NRSN2Q9GZP1 204 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 TWSG1Q9GZX9 223 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 C11orf54Q9H0W9 315 aaPredicted RBP9.53□□□□□ -0.88
LIMA1-201ENST00000341247 TMEM165Q9HC07 324 aa9.53□□□□□ -0.88
LIMA1-201ENST00000341247 DHCR7Q9UBM7 475 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms