RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 CLDN24A6NM45 220 aa20.18■□□□□ 0.82
PBX1-201ENST00000340699 HNRNPCL2B2RXH8 293 aa20.18■□□□□ 0.82
PBX1-201ENST00000340699 HNRNPCL3B7ZW38 293 aa20.18■□□□□ 0.82
PBX1-201ENST00000340699 ETV2O00321 342 aaPredicted RBP20.18■□□□□ 0.82
PBX1-201ENST00000340699 HNRNPCL1O60812 293 aaKnown RBP20.18■□□□□ 0.82
PBX1-201ENST00000340699 SMNDC1O75940 238 aaKnown RBP eCLIP20.18■□□□□ 0.82
PBX1-201ENST00000340699 AQP8O94778 261 aa20.18■□□□□ 0.82
PBX1-201ENST00000340699 HNRNPCL4P0DMR1 293 aa20.18■□□□□ 0.82
PBX1-201ENST00000340699 RPS4Y1P22090 263 aaKnown RBP20.18■□□□□ 0.82
PBX1-201ENST00000340699 SLC7A1P30825 629 aa20.18■□□□□ 0.82
PBX1-201ENST00000340699 SIRPAP78324 504 aa20.18■□□□□ 0.82
PBX1-201ENST00000340699 GUCY1A3Q02108 690 aa20.18■□□□□ 0.82
PBX1-201ENST00000340699 MERTKQ12866 999 aa20.18■□□□□ 0.82
PBX1-201ENST00000340699 SNTB1Q13884 538 aaKnown RBP20.18■□□□□ 0.82
PBX1-201ENST00000340699 C3orf33Q6P1S2 294 aa20.18■□□□□ 0.82
PBX1-201ENST00000340699 OR52P1PQ8NH57 321 aa20.18■□□□□ 0.82
PBX1-201ENST00000340699 CNOT9Q92600 299 aaKnown RBP20.18■□□□□ 0.82
PBX1-201ENST00000340699 CPNE4Q96A23 557 aaPredicted RBP20.18■□□□□ 0.82
PBX1-201ENST00000340699 ZNF524Q96C55 264 aa20.18■□□□□ 0.82
PBX1-201ENST00000340699 STARD4Q96DR4 205 aa20.18■□□□□ 0.82
PBX1-201ENST00000340699 FGFR1OP2Q9NVK5 253 aa20.18■□□□□ 0.82
PBX1-201ENST00000340699 SLC25A37Q9NYZ2 338 aa20.18■□□□□ 0.82
PBX1-201ENST00000340699 SLAMF8Q9P0V8 285 aa20.18■□□□□ 0.82
PBX1-201ENST00000340699 LEF1Q9UJU2 399 aaPredicted RBP20.18■□□□□ 0.82
PBX1-201ENST00000340699 ZNF232Q9UNY5 417 aa20.18■□□□□ 0.82
PBX1-201ENST00000340699 CORO2BQ9UQ03 480 aa20.18■□□□□ 0.82
PBX1-201ENST00000340699 NDUFAF1Q9Y375 327 aa20.18■□□□□ 0.82
PBX1-201ENST00000340699 HEATR5AQ86XA9 2040 aa20.18■□□□□ 0.82
PBX1-201ENST00000340699 EVPLLA8MZ36 301 aa20.17■□□□□ 0.82
PBX1-201ENST00000340699 C5orf58C9J3I9 102 aa20.17■□□□□ 0.82
PBX1-201ENST00000340699 MSTNO14793 375 aa20.17■□□□□ 0.82
PBX1-201ENST00000340699 ANGPT2O15123 496 aa20.17■□□□□ 0.82
PBX1-201ENST00000340699 BCAS1O75363 584 aaPredicted RBP20.17■□□□□ 0.82
PBX1-201ENST00000340699 PABPC4LP0CB38 370 aaKnown RBP20.17■□□□□ 0.82
PBX1-201ENST00000340699 NID1P14543 1247 aa20.17■□□□□ 0.82
PBX1-201ENST00000340699 UQCRBP14927 111 aa20.17■□□□□ 0.82
PBX1-201ENST00000340699 HOXB9P17482 250 aaPredicted RBP20.17■□□□□ 0.82
PBX1-201ENST00000340699 SHC1P29353 583 aa20.17■□□□□ 0.82
PBX1-201ENST00000340699 KIR2DL2P43627 348 aaPredicted RBP20.17■□□□□ 0.82
PBX1-201ENST00000340699 ARFIP2P53365 341 aa20.17■□□□□ 0.82
PBX1-201ENST00000340699 CTBP2P56545 445 aa20.17■□□□□ 0.82
PBX1-201ENST00000340699 MAPK11Q15759 364 aa20.17■□□□□ 0.82
PBX1-201ENST00000340699 LIN52Q52LA3 116 aa20.17■□□□□ 0.82
PBX1-201ENST00000340699 VWA1Q6PCB0 445 aa20.17■□□□□ 0.82
PBX1-201ENST00000340699 PLEKHM3Q6ZWE6 761 aa20.17■□□□□ 0.82
PBX1-201ENST00000340699 TMEM19Q96HH6 336 aa20.17■□□□□ 0.82
PBX1-201ENST00000340699 ZNF385DQ9H6B1 395 aa20.17■□□□□ 0.82
PBX1-201ENST00000340699 MCCC2Q9HCC0 563 aa20.17■□□□□ 0.82
PBX1-201ENST00000340699 GLRX2Q9NS18 164 aa20.17■□□□□ 0.82
PBX1-201ENST00000340699 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.17■□□□□ 0.82
PBX1-201ENST00000340699 EMC9Q9Y3B6 208 aa20.17■□□□□ 0.82
PBX1-201ENST00000340699 NAV2Q8IVL1 2488 aa20.17■□□□□ 0.82
PBX1-201ENST00000340699 A8MXE2 369 aa20.16■□□□□ 0.82
PBX1-201ENST00000340699 APOBEC1P41238 236 aaKnown RBP20.16■□□□□ 0.82
PBX1-201ENST00000340699 LARS2Q15031 903 aaKnown RBP20.16■□□□□ 0.82
PBX1-201ENST00000340699 MRPL2Q5T653 305 aaKnown RBP20.16■□□□□ 0.82
PBX1-201ENST00000340699 FAM214BQ7L5A3 538 aa20.16■□□□□ 0.82
PBX1-201ENST00000340699 BTLAQ7Z6A9 289 aa20.16■□□□□ 0.82
PBX1-201ENST00000340699 ZNF440Q8IYI8 595 aa20.16■□□□□ 0.82
PBX1-201ENST00000340699 TSPEARQ8WU66 669 aa20.16■□□□□ 0.82
PBX1-201ENST00000340699 GMPPAQ96IJ6 420 aaPredicted RBP20.16■□□□□ 0.82
PBX1-201ENST00000340699 ARMC7Q9H6L4 198 aa20.16■□□□□ 0.82
PBX1-201ENST00000340699 A4GALTQ9NPC4 353 aa20.16■□□□□ 0.82
PBX1-201ENST00000340699 MRGBPQ9NV56 204 aa20.16■□□□□ 0.82
PBX1-201ENST00000340699 DNAJB12Q9NXW2 375 aaKnown RBP20.16■□□□□ 0.82
PBX1-201ENST00000340699 VAPAQ9P0L0 249 aa20.16■□□□□ 0.82
PBX1-201ENST00000340699 SPIN1Q9Y657 262 aaPredicted RBP20.16■□□□□ 0.82
PBX1-201ENST00000340699 TUBAL3A6NHL2 446 aa20.15■□□□□ 0.82
PBX1-201ENST00000340699 NUDT7P0C024 238 aa20.15■□□□□ 0.82
PBX1-201ENST00000340699 BMP2P12643 396 aa20.15■□□□□ 0.82
PBX1-201ENST00000340699 CPOXP36551 454 aa20.15■□□□□ 0.82
PBX1-201ENST00000340699 IDH2P48735 452 aaKnown RBP20.15■□□□□ 0.82
PBX1-201ENST00000340699 SORDQ00796 357 aa20.15■□□□□ 0.82
PBX1-201ENST00000340699 ZSWIM7Q19AV6 140 aa20.15■□□□□ 0.82
PBX1-201ENST00000340699 RPS26P11Q5JNZ5 115 aaPredicted RBP20.15■□□□□ 0.82
PBX1-201ENST00000340699 GCNT6Q5T4J0 391 aa20.15■□□□□ 0.82
PBX1-201ENST00000340699 PRAMEF8Q5VWM4 474 aa20.15■□□□□ 0.82
PBX1-201ENST00000340699 PRAMEF7Q5VXH5 474 aa20.15■□□□□ 0.82
PBX1-201ENST00000340699 GRINAQ7Z429 371 aa20.15■□□□□ 0.82
PBX1-201ENST00000340699 VRK2Q86Y07 508 aa20.15■□□□□ 0.82
PBX1-201ENST00000340699 MSRB3Q8IXL7 192 aa20.15■□□□□ 0.82
PBX1-201ENST00000340699 ZZZ3Q8IYH5 903 aa20.15■□□□□ 0.82
PBX1-201ENST00000340699 SLC25A43Q8WUT9 341 aaPredicted RBP20.15■□□□□ 0.82
PBX1-201ENST00000340699 CCDC134Q9H6E4 229 aa20.15■□□□□ 0.82
PBX1-201ENST00000340699 GALNT8Q9NY28 637 aa20.15■□□□□ 0.82
PBX1-201ENST00000340699 PROCRQ9UNN8 238 aa20.15■□□□□ 0.82
PBX1-201ENST00000340699 IFT52Q9Y366 437 aa20.15■□□□□ 0.82
PBX1-201ENST00000340699 DSPPQ9NZW4 1301 aa20.15■□□□□ 0.82
PBX1-201ENST00000340699 MAST4O15021 2626 aa20.15■□□□□ 0.82
PBX1-201ENST00000340699 CFAP73A6NFT4 308 aa20.14■□□□□ 0.81
PBX1-201ENST00000340699 THBS1P07996 1170 aa20.14■□□□□ 0.81
PBX1-201ENST00000340699 CD1EP15812 388 aa20.14■□□□□ 0.81
PBX1-201ENST00000340699 FKBP2P26885 142 aaKnown RBP20.14■□□□□ 0.81
PBX1-201ENST00000340699 MDH1P40925 334 aaKnown RBP20.14■□□□□ 0.81
PBX1-201ENST00000340699 HTR3AP46098 478 aa20.14■□□□□ 0.81
PBX1-201ENST00000340699 ZNF239Q16600 458 aaKnown RBP20.14■□□□□ 0.81
PBX1-201ENST00000340699 BBS10Q8TAM1 723 aa20.14■□□□□ 0.81
PBX1-201ENST00000340699 FAM222BQ8WU58 562 aa20.14■□□□□ 0.81
PBX1-201ENST00000340699 ROBO4Q8WZ75 1007 aa20.14■□□□□ 0.81
PBX1-201ENST00000340699 MAL2Q969L2 176 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms