RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 ZNF773Q6PK81 442 aa6.56□□□□□ -1.36
NUP43-201ENST00000340413 ZNF620Q6ZNG0 422 aa6.56□□□□□ -1.36
NUP43-201ENST00000340413 SLC38A2Q96QD8 506 aa6.56□□□□□ -1.36
NUP43-201ENST00000340413 SIGLEC11Q96RL6 698 aa6.56□□□□□ -1.36
NUP43-201ENST00000340413 LHPPQ9H008 270 aa6.56□□□□□ -1.36
NUP43-201ENST00000340413 DUSP21Q9H596 190 aa6.56□□□□□ -1.36
NUP43-201ENST00000340413 CORINQ9Y5Q5 1042 aa6.56□□□□□ -1.36
NUP43-201ENST00000340413 V9GYQ6 96 aa6.56□□□□□ -1.36
NUP43-201ENST00000340413 SCN3AQ9NY46 2000 aa6.56□□□□□ -1.36
NUP43-201ENST00000340413 TRAV36DV7A0A075B6V5 113 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 OR10H3O60404 316 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 ICOSLGO75144 302 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 NPIPB7O75200 414 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 ANGPTL1O95841 491 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 GASTP01350 101 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 CASRP41180 1078 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 NR1H2P55055 460 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 GABREP78334 506 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 CAMK2BQ13554 666 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.55□□□□□ -1.36
NUP43-201ENST00000340413 C6orf141Q5SZD1 244 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 C6orf52Q5T4I8 152 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 CCNJQ5T5M9 372 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 IGFL2Q6UWQ7 119 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 DHRS13Q6UX07 377 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 GALNT10Q86SR1 603 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 GID4Q8IVV7 300 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 ZNF321PQ8N8H1 164 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 SIMC1Q8NDZ2 872 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 VANGL1Q8TAA9 524 aaPredicted RBP6.55□□□□□ -1.36
NUP43-201ENST00000340413 TEX47Q8TBZ9 253 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 SGTBQ96EQ0 304 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 SMURF2Q9HAU4 748 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 INPP5EQ9NRR6 644 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 SLC7A7Q9UM01 511 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 ZNF891A8MT65 544 aaPredicted RBP6.55□□□□□ -1.36
NUP43-201ENST00000340413 KDM4EB2RXH2 506 aaPredicted RBP6.55□□□□□ -1.36
NUP43-201ENST00000340413 CEACAM4O75871 244 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 THY1P04216 161 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 SLC6A6P31641 620 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 DLSTP36957 453 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 MYBPC1Q00872 1141 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 FGD3Q5JSP0 725 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 ARHGAP11AQ6P4F7 1023 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 ZER1Q7Z7L7 766 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 ZAR1Q86SH2 424 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 RPS19BP1Q86WX3 136 aaKnown RBP6.55□□□□□ -1.36
NUP43-201ENST00000340413 LNX2Q8N448 690 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 OR4N2Q8NGD1 307 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 CRELD1Q96HD1 420 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 MNTQ99583 582 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 VCX3AQ9NNX9 186 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 ATP13A2Q9NQ11 1180 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 FBXO34Q9NWN3 711 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 FLRT3Q9NZU0 649 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 FOXJ2Q9P0K8 574 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 HIF3AQ9Y2N7 669 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 GJE1A6NN92 205 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 TRIM3O75382 744 aaPredicted RBP6.55□□□□□ -1.36
NUP43-201ENST00000340413 LINGO3P0C6S8 592 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 CHMP24386 653 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 ALDH3B2P48448 385 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 CASP9P55211 416 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 ZNF117Q03924 483 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 TARDBPQ13148 414 aaKnown RBP eCLIP6.55□□□□□ -1.36
NUP43-201ENST00000340413 CDK5R2Q13319 367 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 PIN1Q13526 163 aaPredicted RBP6.55□□□□□ -1.36
NUP43-201ENST00000340413 ALG10BQ5I7T1 473 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 SLC35D3Q5M8T2 416 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 OTUD3Q5T2D3 398 aaPredicted RBP6.55□□□□□ -1.36
NUP43-201ENST00000340413 TIGD3Q6B0B8 471 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 GPR139Q6DWJ6 353 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 SLC27A4Q6P1M0 643 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 DPY19L2P2Q6ZN68 376 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 OR52L1Q8NGH7 329 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 OR4C3Q8NH37 302 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 SNIP1Q8TAD8 396 aaKnown RBP6.55□□□□□ -1.36
NUP43-201ENST00000340413 KCNE4Q8WWG9 221 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 CYGBQ8WWM9 190 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 ASB15Q8WXK1 588 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 RFKQ969G6 155 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 MYDGFQ969H8 173 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 ANKRA2Q9H9E1 313 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 CLN6Q9NWW5 311 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 HAO2Q9NYQ3 351 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 UBAP1Q9NZ09 502 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 FBXL4Q9UKA2 621 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 CHCHD2Q9Y6H1 151 aaPredicted RBP6.55□□□□□ -1.36
NUP43-201ENST00000340413 CACNA1BQ00975 2339 aa6.55□□□□□ -1.36
NUP43-201ENST00000340413 A8MVM7 634 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 J3KTA2 159 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 SLC15A1P46059 708 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 RPL5P46777 297 aaKnown RBP6.54□□□□□ -1.36
NUP43-201ENST00000340413 NHLH1Q02575 133 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 POU4F2Q12837 409 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 INAQ16352 499 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 BTBD16Q32M84 506 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 TBC1D25Q3MII6 688 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 SMARCD3Q6STE5 483 aa6.54□□□□□ -1.36
NUP43-201ENST00000340413 MFSD8Q8NHS3 518 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms