RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 TAPBPLQ9BX59 468 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 N6AMT1Q9Y5N5 214 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 TEX51A0A1B0GUA7 166 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 SH3D21A4FU49 640 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 SPANXN2Q5MJ10 180 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 DHRS4L2Q6PKH6 230 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 TMPRSS9Q7Z410 1059 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 FAM83FQ8NEG4 500 aaPredicted RBP9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 RASD2Q96D21 266 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 MSANTD3Q96H12 275 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 ZNF764Q96H86 408 aaPredicted RBP9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 POLDIP3Q9BY77 421 aaKnown RBP9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 MKKSQ9NPJ1 570 aaPredicted RBP9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 MEPEQ9NQ76 525 aaPredicted RBP9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 ACAD8Q9UKU7 415 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 GRIP1Q9Y3R0 1128 aa9.37□□□□□ -0.91
RBFOX1-202ENST00000340209 BOLA2-SMG1P6H3BVE0 249 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 DPM1O60762 260 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 ICOSLGO75144 302 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 ALOX12BO75342 701 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 RPP14O95059 124 aaKnown RBP9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 RASSF6Q6ZTQ3 369 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 MARCH9Q86YJ5 346 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 KDM8Q8N371 416 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 SIRT6Q8N6T7 355 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 DYNC2LI1Q8TCX1 351 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 SLC2A12Q8TD20 617 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 GUCD1Q96NT3 240 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 ISG20L2Q9H9L3 353 aaKnown RBP9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 VDAC3Q9Y277 283 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 TIAF1O95411 115 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 HLA-DQA2P01906 255 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 CT45A8P0DMV1 189 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 CT45A9P0DMV2 189 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 POU3F3P20264 500 aaPredicted RBP9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 HLA-BQ31612 363 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 CT45A2Q5DJT8 189 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 SRA1Q9HD15 236 aaKnown RBP9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 KIF26BQ2KJY2 2108 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 A0A1W2PRG6 482 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 LILRA5A6NI73 299 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 MASP2O00187 686 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 DVL2O14641 736 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 IGLV3-19P01714 112 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 NGFRP08138 427 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 FPR3P25089 353 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 PYCR1P32322 319 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 SDC2P34741 201 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 STAT5AP42229 794 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 FBXW4P57775 412 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 CCL7P80098 99 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 TIMM50Q3ZCQ8 353 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 TP53I3Q53FA7 332 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 KLHL22Q53GT1 634 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 RTL4Q6ZR62 310 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 C9orf43Q8TAL5 461 aaPredicted RBP9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 CRELD1Q96HD1 420 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 VSTM2LQ96N03 204 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 NUDT9Q9BW91 350 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 TIGARQ9NQ88 270 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 DNAJB12Q9NXW2 375 aaKnown RBP9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 A0A087WV62 115 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 SERINC4A6NH21 518 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 SHISA8B8ZZ34 492 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 NKX2-2O95096 273 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 HEXBP07686 556 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 ACVR2AP27037 513 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 RPS5P46782 204 aaKnown RBP9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 CLDN22Q8N7P3 220 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 CADM4Q8NFZ8 388 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 UFD1Q92890 307 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 RFKQ969G6 155 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 NMNAT3Q96T66 252 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 PRSS27Q9BQR3 290 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 PLCXD1Q9NUJ7 323 aa9.36□□□□□ -0.91
RBFOX1-202ENST00000340209 DSPPQ9NZW4 1301 aa9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 LOC110117498-PIK3R3F6TDL0 507 aa9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 TFECO14948 347 aaPredicted RBP9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 NDUFB5O43674 189 aa9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 UTS2O95399 124 aa9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 LALBAP00709 142 aa9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 ZGLP1P0C6A0 271 aa9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 RORAP35398 523 aa9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 RPS19P39019 145 aaKnown RBP9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 PSMB10P40306 273 aa9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 AQP2P41181 271 aa9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 ATP12AP54707 1039 aa9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 SNRPGP62308 76 aaKnown RBP9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 CEBPEQ15744 281 aa9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 FAM27D1Q5T7N8 215 aa9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 SLC22A16Q86VW1 577 aa9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 LINC00471Q8N535 108 aa9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 FNDC8Q8TC99 324 aa9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 DTNBP1Q96EV8 351 aa9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 STACQ99469 402 aa9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 G6PC3Q9BUM1 346 aa9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 AKIRIN1Q9H9L7 192 aaPredicted RBP9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 G3V3Y1 287 aa9.35□□□□□ -0.91
RBFOX1-202ENST00000340209 SURF4O15260 269 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms