RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 FGD2Q7Z6J4 655 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 RANBP3LQ86VV4 465 aaPredicted RBP10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 EID3Q8N140 333 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 CADM2Q8N3J6 435 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 MEIOBQ8N635 442 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 FAM156AQ8NDB6 213 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 OR52E4Q8NGH9 312 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 PRR7Q8TB68 274 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 POC1BQ8TC44 478 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 SLC7A6OSQ96CW6 309 aaPredicted RBP10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 TPD52L3Q96J77 140 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 ARHGDIGQ99819 225 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 MUC13Q9H3R2 512 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 SELENONQ9NZV5 590 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 SPRR3Q9UBC9 169 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 CAMK2AQ9UQM7 478 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 SH3GLB1Q9Y371 365 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 SNX13Q9Y5W8 968 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 SPIN1Q9Y657 262 aaPredicted RBP10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 CHD6Q8TD26 2715 aa10.77□□□□□ -0.69
SPTLC1-202ENST00000337841 TRGV8A0A0C4DH27 118 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 A0A1B0GUH1 482 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 FIGNL2A6NMB9 653 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 SHISA8B8ZZ34 492 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 H3BML4 177 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 J3QKU1 62 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 ETV2O00321 342 aaPredicted RBP10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 GSC2O15499 205 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 FRS3O43559 492 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 NTN1O95631 604 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 SERPINA1P01009 418 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 PRG2P13727 222 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 GABRA1P14867 456 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 CXCR1P25024 350 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 ELK4P28324 431 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 PTGER4P35408 488 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 MSX2P35548 267 aaPredicted RBP10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 POLR2HP52434 150 aaKnown RBP10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 MAP2K6P52564 334 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 DLX5P56178 289 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 RPS3AP61247 264 aaKnown RBP10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 HOXC5Q00444 222 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 PLAURQ03405 335 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 SRYQ05066 204 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 FOXF1Q12946 379 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 TRIM25Q14258 630 aaKnown RBP10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 FXNQ16595 210 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 ZNF585AQ6P3V2 769 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 PLEKHM3Q6ZWE6 761 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 CBLL1Q75N03 491 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 DOLPP1Q86YN1 238 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 CHERPQ8IWX8 916 aaKnown RBP10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 LILRA2Q8N149 483 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 GPR32P1Q8NGA4 272 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 OR5M9Q8NGP3 310 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 POP5Q969H6 163 aaKnown RBP10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 MCUR1Q96AQ8 359 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 WDYHV1Q96HA8 205 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 NSMCE2Q96MF7 247 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 MCHR1Q99705 422 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 KLHDC3Q9BQ90 382 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 RSPO3Q9BXY4 272 aaPredicted RBP10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 ADAM19Q9H013 955 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 TP63Q9H3D4 680 aaPredicted RBP10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 TNFRSF10DQ9UBN6 386 aa10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 TESQ9UGI8 421 aaKnown RBP10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 SAMD4AQ9UPU9 718 aaKnown RBP10.76□□□□□ -0.69
SPTLC1-202ENST00000337841 TMED7-TICAM2A0A0A6YYA0 188 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 H0Y3Z8 333 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 ZNHIT1O43257 154 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 FMO6PO60774 539 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 ADAM11O75078 769 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 WDR1O75083 606 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 EPPINO95925 133 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 STSP08842 583 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 PLA2G2AP14555 144 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 ZNF708P17019 499 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 PSMA4P25789 261 aaKnown RBP10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 TACR3P29371 465 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 IFNA8P32881 189 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 CLK1P49759 484 aaKnown RBP10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 LHX2P50458 406 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 ZNF136P52737 540 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 CRYBA2P53672 197 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 TRAP1Q12931 704 aaKnown RBP10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 SELENBP1Q13228 472 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 C3AR1Q16581 482 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 NRF1Q16656 503 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 TMEM176BQ3YBM2 270 aaPredicted RBP10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 IFI44LQ53G44 452 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 TMEM211Q6ICI0 200 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 ULK3Q6PHR2 472 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 POMZP3Q6PJE2 187 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 CD163Q86VB7 1156 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 CARM1Q86X55 608 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 DHFR2Q86XF0 187 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 ADGRG3Q86Y34 549 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 LSMEM1Q8N8F7 131 aa10.75□□□□□ -0.69
SPTLC1-202ENST00000337841 ATP6V1C2Q8NEY4 427 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms