RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 CHAF1BQ13112 559 aa13.41□□□□□ -0.26
CBX3-201ENST00000337620 CBFBQ13951 182 aa13.41□□□□□ -0.26
CBX3-201ENST00000337620 TOMM34Q15785 309 aaPredicted RBP13.41□□□□□ -0.26
CBX3-201ENST00000337620 B3GNTL1Q67FW5 361 aaPredicted RBP13.41□□□□□ -0.26
CBX3-201ENST00000337620 CD300LDQ6UXZ3 194 aa13.41□□□□□ -0.26
CBX3-201ENST00000337620 CDK20Q8IZL9 346 aa13.41□□□□□ -0.26
CBX3-201ENST00000337620 SETD9Q8NE22 299 aa13.41□□□□□ -0.26
CBX3-201ENST00000337620 BRIX1Q8TDN6 353 aaKnown RBP13.41□□□□□ -0.26
CBX3-201ENST00000337620 ZNF524Q96C55 264 aa13.41□□□□□ -0.26
CBX3-201ENST00000337620 THOC3Q96J01 351 aaKnown RBP13.41□□□□□ -0.26
CBX3-201ENST00000337620 ATP13A2Q9NQ11 1180 aa13.41□□□□□ -0.26
CBX3-201ENST00000337620 C20orf141Q9NUB4 165 aa13.41□□□□□ -0.26
CBX3-201ENST00000337620 ADAM10O14672 748 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 TNFAIP8O95379 198 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 ELK4P28324 431 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 ISL1P61371 349 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 MEP1AQ16819 746 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 COL28A1Q2UY09 1125 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 SWT1Q5T5J6 900 aaKnown RBP13.4□□□□□ -0.26
CBX3-201ENST00000337620 LINC00114Q6XXX2 140 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 VASH2Q86V25 355 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 UBE2FQ969M7 185 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 PITX2Q99697 317 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 DSN1Q9H410 356 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 MEPEQ9NQ76 525 aaPredicted RBP13.4□□□□□ -0.26
CBX3-201ENST00000337620 MYRFQ9Y2G1 1151 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 ELOA3DA6NLF2 546 aaPredicted RBP13.4□□□□□ -0.26
CBX3-201ENST00000337620 CDC40O60508 579 aaKnown RBP eCLIP13.4□□□□□ -0.26
CBX3-201ENST00000337620 DXOO77932 396 aaKnown RBP13.4□□□□□ -0.26
CBX3-201ENST00000337620 FPR3P25089 353 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 MST1P26927 711 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 GGT2P36268 569 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 CASP3P42574 277 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 RBM34P42696 430 aaKnown RBP13.4□□□□□ -0.26
CBX3-201ENST00000337620 SLC1A3P43003 542 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 RPS6KA3P51812 740 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 GAS1P54826 345 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 PRKCDQ05655 676 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 CD47Q08722 323 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 CAMK2BQ13554 666 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 ELOA3BQ3SY89 546 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 DCAF10Q5QP82 559 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 CCDC71Q8IV32 467 aaPredicted RBP13.4□□□□□ -0.26
CBX3-201ENST00000337620 ELOA3Q8NG57 546 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 FAM81AQ8TBF8 368 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 BPIFA2Q96DR5 249 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 IP6K3Q96PC2 410 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 DPH1Q9BZG8 443 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 EGLN3Q9H6Z9 239 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 RASSF1Q9NS23 344 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 HPF1Q9NWY4 346 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 MED11Q9P086 117 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 PPP4R1LQ9P1A2 415 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 AASSQ9UDR5 926 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 CHCHD2Q9Y6H1 151 aaPredicted RBP13.4□□□□□ -0.26
CBX3-201ENST00000337620 ASPMQ8IZT6 3477 aa13.4□□□□□ -0.26
CBX3-201ENST00000337620 CELSR3Q9NYQ7 3312 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 A0A087WUJ7 227 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 E9PQ18 207 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 CDC42EP2O14613 210 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 SMNDC1O75940 238 aaKnown RBP eCLIP13.39□□□□□ -0.27
CBX3-201ENST00000337620 TP53P04637 393 aaPredicted RBP13.39□□□□□ -0.27
CBX3-201ENST00000337620 GP1BBP13224 206 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 MAKP20794 623 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 TACR3P29371 465 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 CTU2Q2VPK5 515 aaKnown RBP13.39□□□□□ -0.27
CBX3-201ENST00000337620 ACER2Q5QJU3 275 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 ATP1A1-AS1Q5TC04 95 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 PRAMEF20Q5VT98 475 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 H3F3CQ6NXT2 135 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 TMEM154Q6P9G4 183 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 POMZP3Q6PJE2 187 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 KIF18BQ86Y91 864 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 ARMC10Q8N2F6 343 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 GPR119Q8TDV5 335 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 RNF138Q8WVD3 245 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 ZNF426Q9BUY5 554 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 SDHAF3Q9NRP4 125 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 ANKRD10Q9NXR5 420 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 ZAR1LA6NP61 321 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 SAGP10523 405 aaPredicted RBP13.39□□□□□ -0.27
CBX3-201ENST00000337620 PNMTP11086 282 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 FUT1P19526 365 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 PTGDSP41222 190 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 CRYZQ08257 329 aaKnown RBP13.39□□□□□ -0.27
CBX3-201ENST00000337620 QPRTQ15274 297 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 ZNF468Q5VIY5 522 aaPredicted RBP13.39□□□□□ -0.27
CBX3-201ENST00000337620 RASSF6Q6ZTQ3 369 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 ATG4DQ86TL0 474 aaPredicted RBP13.39□□□□□ -0.27
CBX3-201ENST00000337620 CNIH3Q8TBE1 160 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 ADNPQ9H2P0 1102 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 SCOCQ9UIL1 159 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 TMEM5Q9Y2B1 443 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 WIF1Q9Y5W5 379 aa13.39□□□□□ -0.27
CBX3-201ENST00000337620 PCNX3Q9H6A9 2034 aa13.38□□□□□ -0.27
CBX3-201ENST00000337620 TRABD2BA6NFA1 517 aa13.38□□□□□ -0.27
CBX3-201ENST00000337620 KLF4O43474 513 aa13.38□□□□□ -0.27
CBX3-201ENST00000337620 CCNA2P20248 432 aa13.38□□□□□ -0.27
CBX3-201ENST00000337620 ITGA3P26006 1051 aa13.38□□□□□ -0.27
CBX3-201ENST00000337620 CTBP2P56545 445 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms