RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 PRAMEF9Q5VWM5 478 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 KANSL1Q7Z3B3 1105 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 SERPINA12Q8IW75 414 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 SYNPOQ8N3V7 929 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 SDR16C5Q8N3Y7 309 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 ZG16BQ96DA0 208 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 SLC6A18Q96N87 628 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 AMDHD1Q96NU7 426 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 ZNF559Q9BR84 538 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 PDCD10Q9BUL8 212 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 KATNB1Q9BVA0 655 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 FOXQ1Q9C009 403 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 GABARAPL1Q9H0R8 117 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 OR10A4Q9H209 315 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 TCEAL2Q9H3H9 227 aaPredicted RBP6.03□□□□□ -1.44
HMG20A-201ENST00000336216 METTL7AQ9H8H3 244 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 CNOT2Q9NZN8 540 aaKnown RBP6.03□□□□□ -1.44
HMG20A-201ENST00000336216 KLHL42Q9P2K6 505 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 LRIT1Q9P2V4 623 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 NCDNQ9UBB6 729 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 FTSJ1Q9UET6 329 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 PFDN2Q9UHV9 154 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 CCL27Q9Y4X3 112 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 RALGAPA2Q2PPJ7 1873 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 HYKKA2RU49 373 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 LRIT2A6NDA9 550 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 C17orf105B2RV13 164 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 B8ZZF3 427 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 ADAP00813 363 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 MT-ND4P03905 459 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 ARAFP10398 606 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 UGT2B7P16662 529 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 CCNOP22674 350 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 LCN1P31025 176 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 DNASE1L1P49184 302 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 SRSF5Q13243 272 aaKnown RBP6.03□□□□□ -1.44
HMG20A-201ENST00000336216 NFATC4Q14934 902 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 ALG11Q2TAA5 492 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 YIF1BQ5BJH7 314 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 ACSM5Q6NUN0 579 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 NUP54Q7Z3B4 507 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 KIF18BQ86Y91 864 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 SFTPA2Q8IWL1 248 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 ZNF527Q8NB42 609 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 GNPDA2Q8TDQ7 276 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 DNAJA4Q8WW22 397 aaPredicted RBP6.03□□□□□ -1.44
HMG20A-201ENST00000336216 SPRYD4Q8WW59 207 aaPredicted RBP6.03□□□□□ -1.44
HMG20A-201ENST00000336216 NSMAFQ92636 917 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 PMM1Q92871 262 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 ZDHHC12Q96GR4 267 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 MRGPRX1Q96LB2 322 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 TRIM36Q9NQ86 728 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 RPH3AQ9Y2J0 694 aaPredicted RBP6.03□□□□□ -1.44
HMG20A-201ENST00000336216 PADI2Q9Y2J8 665 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 MAB21L2Q9Y586 359 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 IER3IP1Q9Y5U9 82 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 TRBV2A0A0J9YWF9 115 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 PRAMEF26H0Y7S4 382 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 PIP5K1CO60331 668 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 SLC22A5O76082 557 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 F10P00742 488 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 ALDOBP05062 364 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 APEHP13798 732 aaKnown RBP6.03□□□□□ -1.44
HMG20A-201ENST00000336216 MAOAP21397 527 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 RPL35P42766 123 aaKnown RBP6.03□□□□□ -1.44
HMG20A-201ENST00000336216 HNRNPKP61978 463 aaKnown RBP eCLIP6.03□□□□□ -1.44
HMG20A-201ENST00000336216 ERVK-25P63136 954 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 LSM11P83369 360 aaKnown RBP eCLIP6.03□□□□□ -1.44
HMG20A-201ENST00000336216 TFF2Q03403 129 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 DLX2Q07687 328 aaPredicted RBP6.03□□□□□ -1.44
HMG20A-201ENST00000336216 PLCXD2Q0VAA5 305 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 SNTB2Q13425 540 aaKnown RBP6.03□□□□□ -1.44
HMG20A-201ENST00000336216 EIF4EBP2Q13542 120 aaPredicted RBP6.03□□□□□ -1.44
HMG20A-201ENST00000336216 MRPL2Q5T653 305 aaKnown RBP6.03□□□□□ -1.44
HMG20A-201ENST00000336216 PRAMEF17Q5VTA0 474 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 ABHD17CQ6PCB6 329 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 CFAP77Q6ZQR2 320 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 ESPNLQ6ZVH7 1005 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 IKBIPQ70UQ0 350 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 ZNF627Q7L945 461 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 SYT9Q86SS6 491 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 ZNF547Q8IVP9 402 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 TMEM151BQ8IW70 566 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 KDM8Q8N371 416 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 ANKRD53Q8N9V6 530 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 OR52I1Q8NGK6 324 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 OR8S1Q8NH09 359 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 MR1Q95460 341 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 SLC25A46Q96AG3 418 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 SDHCQ99643 169 aaPredicted RBP6.03□□□□□ -1.44
HMG20A-201ENST00000336216 BTBD2Q9BX70 525 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 GABARAPL3Q9BY60 117 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 OR51J1Q9H342 316 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 CD93Q9NPY3 652 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 ATP13A2Q9NQ11 1180 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 THSD1Q9NS62 852 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 PLCXD1Q9NUJ7 323 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 KLF15Q9UIH9 416 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 RASD1Q9Y272 281 aa6.03□□□□□ -1.44
HMG20A-201ENST00000336216 IGHV3-20A0A0C4DH32 117 aa6.02□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms