RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 SLC38A9Q8NBW4 561 aa11.59□□□□□ -0.55
LIMK1-201ENST00000336180 OR4K13Q8NH42 304 aa11.59□□□□□ -0.55
LIMK1-201ENST00000336180 ZDHHC12Q96GR4 267 aa11.59□□□□□ -0.55
LIMK1-201ENST00000336180 SECISBP2Q96T21 854 aaKnown RBP11.59□□□□□ -0.55
LIMK1-201ENST00000336180 CHRDQ9H2X0 955 aa11.59□□□□□ -0.55
LIMK1-201ENST00000336180 TMEM27Q9HBJ8 222 aa11.59□□□□□ -0.55
LIMK1-201ENST00000336180 KLHL1Q9NR64 748 aa11.59□□□□□ -0.55
LIMK1-201ENST00000336180 DNAJB12Q9NXW2 375 aaKnown RBP11.59□□□□□ -0.55
LIMK1-201ENST00000336180 MPDZO75970 2070 aa11.59□□□□□ -0.55
LIMK1-201ENST00000336180 A0A087WV62 115 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 CLDN25C9JDP6 229 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 SURF4O15260 269 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 OR5F1O95221 314 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 HPGDP15428 266 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 IFNGR2P38484 337 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 RPS19P39019 145 aaKnown RBP11.58□□□□□ -0.56
LIMK1-201ENST00000336180 CSNK2BP67870 215 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 DECR1Q16698 335 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 SLC36A4Q6YBV0 504 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 RASSF6Q6ZTQ3 369 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 CENPSQ8N2Z9 138 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 RFLNBQ8N5W9 214 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 TMEM99Q8N816 258 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 SDR9C7Q8NEX9 313 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 PTPMT1Q8WUK0 201 aaPredicted RBP11.58□□□□□ -0.56
LIMK1-201ENST00000336180 DACH2Q96NX9 599 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 FOXN4Q96NZ1 517 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 CD180Q99467 661 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 ELF4Q99607 663 aaPredicted RBP11.58□□□□□ -0.56
LIMK1-201ENST00000336180 CDADC1Q9BWV3 514 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.58□□□□□ -0.56
LIMK1-201ENST00000336180 Q9N2J8 555 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 FGF21Q9NSA1 209 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 DAPK2Q9UIK4 370 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 CBLCQ9ULV8 474 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 C2orf92A0A1B0GVN3 265 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 MPZL2O60487 215 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 SLITRK5O94991 958 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 NUDT14O95848 222 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 TSPAN19P0C672 248 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 MYL12AP19105 171 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 NR0B1P51843 470 aaKnown RBP11.58□□□□□ -0.56
LIMK1-201ENST00000336180 SHBQ15464 509 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 RPTNQ6XPR3 784 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 GPR135Q8IZ08 494 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 OR2T33Q8NG76 320 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 OR10H4Q8NGA5 316 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 ASPNQ9BXN1 380 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 APMAPQ9HDC9 416 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 TBCCD1Q9NVR7 557 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 C14orf119Q9NWQ9 140 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 WNT16Q9UBV4 365 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 A0A1W2PPK0 400 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 SH3D21A4FU49 640 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 LYPD3O95274 346 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 RAB36O95755 333 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 PAHP00439 452 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 ACAA2P42765 397 aaKnown RBP11.58□□□□□ -0.56
LIMK1-201ENST00000336180 CRMP1Q14194 572 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 GRM7Q14831 915 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 EIPR1Q53HC9 387 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 CXXC5Q7LFL8 322 aaKnown RBP11.58□□□□□ -0.56
LIMK1-201ENST00000336180 ZNF367Q7RTV3 350 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.58□□□□□ -0.56
LIMK1-201ENST00000336180 OAFQ86UD1 273 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 KLBQ86Z14 1044 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 FAM26EQ8N5C1 309 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 CAMKK1Q8N5S9 505 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 OR6Q1Q8NGQ2 317 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 SHDQ96IW2 340 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 CDCA4Q9BXL8 241 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 H2AFY2Q9P0M6 372 aaPredicted RBP11.58□□□□□ -0.56
LIMK1-201ENST00000336180 MALT1Q9UDY8 824 aa11.58□□□□□ -0.56
LIMK1-201ENST00000336180 CD8B2A6NJW9 211 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 SNPHO15079 494 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 CDRT1O95170 752 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 AGR2O95994 175 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 CD8BP10966 210 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 BMP7P18075 431 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 CELP19835 753 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 GSTM3P21266 225 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 FPR3P25089 353 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 NAA10P41227 235 aaPredicted RBP11.57□□□□□ -0.56
LIMK1-201ENST00000336180 NANOGP1Q8N7R0 232 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 OR6C4Q8NGE1 309 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 ZPLD1Q8TCW7 415 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 FCGR1BQ92637 280 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 HTRA1Q92743 480 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 ERVK13-1Q9NX77 482 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 RPS6KB2Q9UBS0 482 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 OSGIN1Q9UJX0 560 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 LSM2Q9Y333 95 aaKnown RBP11.57□□□□□ -0.56
LIMK1-201ENST00000336180 MED31Q9Y3C7 131 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 SDK2Q58EX2 2172 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 LILRA5A6NI73 299 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 ZSCAN5BA6NJL1 495 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 BLOC1S5-TXNDC5H3BN57 136 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 H7C1C5 153 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 MASP2O00187 686 aa11.57□□□□□ -0.56
LIMK1-201ENST00000336180 SCO2O43819 266 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms