RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 ASXL3Q9C0F0 2248 aa13.72□□□□□ -0.21
UBA1-201ENST00000335972 MN1Q10571 1320 aaPredicted RBP13.72□□□□□ -0.21
UBA1-201ENST00000335972 IRGMA1A4Y4 181 aa13.72□□□□□ -0.21
UBA1-201ENST00000335972 URADA6NGE7 173 aa13.72□□□□□ -0.21
UBA1-201ENST00000335972 TGFBR3LH3BV60 316 aa13.72□□□□□ -0.21
UBA1-201ENST00000335972 IGHA1P01876 353 aa13.72□□□□□ -0.21
UBA1-201ENST00000335972 BMP8BP34820 402 aa13.72□□□□□ -0.21
UBA1-201ENST00000335972 MAGEB1P43366 347 aa13.72□□□□□ -0.21
UBA1-201ENST00000335972 LCN1P1Q5VSP4 162 aa13.72□□□□□ -0.21
UBA1-201ENST00000335972 ESPNLQ6ZVH7 1005 aa13.72□□□□□ -0.21
UBA1-201ENST00000335972 BMP8AQ7Z5Y6 402 aa13.72□□□□□ -0.21
UBA1-201ENST00000335972 CEACAM19Q7Z692 300 aa13.72□□□□□ -0.21
UBA1-201ENST00000335972 CDRT4Q8N9R6 151 aa13.72□□□□□ -0.21
UBA1-201ENST00000335972 OR5W2Q8NH69 310 aa13.72□□□□□ -0.21
UBA1-201ENST00000335972 BAHD1Q8TBE0 780 aaPredicted RBP13.72□□□□□ -0.21
UBA1-201ENST00000335972 EXOGQ9Y2C4 368 aaKnown RBP13.72□□□□□ -0.21
UBA1-201ENST00000335972 CHST10O43529 356 aa13.71□□□□□ -0.21
UBA1-201ENST00000335972 GALR3O60755 368 aaPredicted RBP13.71□□□□□ -0.21
UBA1-201ENST00000335972 MAZP56270 477 aaKnown RBP13.71□□□□□ -0.21
UBA1-201ENST00000335972 ZNF267Q14586 743 aaPredicted RBP13.71□□□□□ -0.21
UBA1-201ENST00000335972 SLC25A35Q3KQZ1 300 aa13.71□□□□□ -0.21
UBA1-201ENST00000335972 AMZ1Q400G9 498 aa13.71□□□□□ -0.21
UBA1-201ENST00000335972 EIPR1Q53HC9 387 aa13.71□□□□□ -0.21
UBA1-201ENST00000335972 OR52E2Q8NGJ4 325 aa13.71□□□□□ -0.21
UBA1-201ENST00000335972 C2orf74A8MZ97 194 aa13.71□□□□□ -0.21
UBA1-201ENST00000335972 GABRG2P18507 467 aa13.71□□□□□ -0.21
UBA1-201ENST00000335972 FGF9P31371 208 aaPredicted RBP13.71□□□□□ -0.21
UBA1-201ENST00000335972 ASAH1Q13510 395 aa13.71□□□□□ -0.21
UBA1-201ENST00000335972 OTPQ5XKR4 325 aa13.71□□□□□ -0.21
UBA1-201ENST00000335972 CD200R1LQ6Q8B3 271 aa13.71□□□□□ -0.21
UBA1-201ENST00000335972 CDK20Q8IZL9 346 aa13.71□□□□□ -0.21
UBA1-201ENST00000335972 VWA5B2Q8N398 1253 aa13.71□□□□□ -0.21
UBA1-201ENST00000335972 SAMD12Q8N8I0 201 aa13.71□□□□□ -0.21
UBA1-201ENST00000335972 DNAJA4Q8WW22 397 aaPredicted RBP13.71□□□□□ -0.21
UBA1-201ENST00000335972 RNF121Q9H920 327 aa13.71□□□□□ -0.21
UBA1-201ENST00000335972 SIGLEC7Q9Y286 467 aa13.71□□□□□ -0.21
UBA1-201ENST00000335972 SPACA6W5XKT8 324 aa13.71□□□□□ -0.21
UBA1-201ENST00000335972 FAM240BA0A1B0GVZ2 78 aa13.71□□□□□ -0.22
UBA1-201ENST00000335972 SLC9B1P1A6NJY1 282 aa13.71□□□□□ -0.22
UBA1-201ENST00000335972 MAOAP21397 527 aa13.71□□□□□ -0.22
UBA1-201ENST00000335972 QPRTQ15274 297 aa13.71□□□□□ -0.22
UBA1-201ENST00000335972 GDPD1Q8N9F7 314 aa13.71□□□□□ -0.22
UBA1-201ENST00000335972 FAM98AQ8NCA5 519 aaKnown RBP13.71□□□□□ -0.22
UBA1-201ENST00000335972 SETD6Q8TBK2 473 aa13.71□□□□□ -0.22
UBA1-201ENST00000335972 ZNRF4Q8WWF5 429 aa13.71□□□□□ -0.22
UBA1-201ENST00000335972 FRMD6Q96NE9 622 aa13.71□□□□□ -0.22
UBA1-201ENST00000335972 ERMAPQ96PL5 475 aaPredicted RBP13.71□□□□□ -0.22
UBA1-201ENST00000335972 ANKRD19PQ9H560 264 aa13.71□□□□□ -0.22
UBA1-201ENST00000335972 PPP1R3EQ9H7J1 279 aa13.71□□□□□ -0.22
UBA1-201ENST00000335972 TMEM27Q9HBJ8 222 aa13.71□□□□□ -0.22
UBA1-201ENST00000335972 LRIT1Q9P2V4 623 aa13.71□□□□□ -0.22
UBA1-201ENST00000335972 CD207Q9UJ71 328 aa13.71□□□□□ -0.22
UBA1-201ENST00000335972 RASD1Q9Y272 281 aa13.71□□□□□ -0.22
UBA1-201ENST00000335972 CENPXA8MT69 81 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 MAP2K3P46734 347 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 SRP9P49458 86 aaKnown RBP13.7□□□□□ -0.22
UBA1-201ENST00000335972 PPP3R1P63098 170 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 ALG10BQ5I7T1 473 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 PLET1Q6UQ28 207 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 OR4C6Q8NH72 309 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 ZMIZ1Q9ULJ6 1067 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 TP53BP1Q12888 1972 aaPredicted RBP13.7□□□□□ -0.22
UBA1-201ENST00000335972 A0A087WV48 116 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 FAM86C2PA6NEL3 165 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 TNFSF14O43557 240 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 APBB3O95704 486 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 SEMA4FO95754 770 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 AGR2O95994 175 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 EIF4EP06730 217 aaKnown RBP13.7□□□□□ -0.22
UBA1-201ENST00000335972 CTSEP14091 401 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 ZNF10P21506 573 aaPredicted RBP13.7□□□□□ -0.22
UBA1-201ENST00000335972 PSMB10P40306 273 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 EVX1P49640 407 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 PSG6Q00889 435 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 TATDN3Q17R31 274 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 SMPDL3BQ92485 455 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 MED18Q9BUE0 208 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 NTMQ9P121 344 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 MPDZO75970 2070 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 A8MUA0 341 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 BRINP1O60477 761 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 RGS9O75916 674 aaPredicted RBP13.7□□□□□ -0.22
UBA1-201ENST00000335972 ATP1B1P05026 303 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 AKT2P31751 481 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 STX4Q12846 297 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 OR4M1Q8NGD0 313 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 OR5M3Q8NGP4 307 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 BRIX1Q8TDN6 353 aaKnown RBP13.7□□□□□ -0.22
UBA1-201ENST00000335972 DEPDC7Q96QD5 511 aa13.7□□□□□ -0.22
UBA1-201ENST00000335972 RIIAD1A6NNX1 92 aa13.69□□□□□ -0.22
UBA1-201ENST00000335972 HHEXQ03014 270 aa13.69□□□□□ -0.22
UBA1-201ENST00000335972 IZUMO1Q8IYV9 350 aa13.69□□□□□ -0.22
UBA1-201ENST00000335972 FAM181AQ8N9Y4 354 aa13.69□□□□□ -0.22
UBA1-201ENST00000335972 OR52N1Q8NH53 320 aa13.69□□□□□ -0.22
UBA1-201ENST00000335972 ZPLD1Q8TCW7 415 aa13.69□□□□□ -0.22
UBA1-201ENST00000335972 SLC7A6Q92536 515 aa13.69□□□□□ -0.22
UBA1-201ENST00000335972 UPRTQ96BW1 309 aa13.69□□□□□ -0.22
UBA1-201ENST00000335972 KRCC1Q9NPI7 259 aaPredicted RBP13.69□□□□□ -0.22
UBA1-201ENST00000335972 ENAMQ9NRM1 1142 aa13.69□□□□□ -0.22
UBA1-201ENST00000335972 PCOLCE2Q9UKZ9 415 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms