RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 OR1E2P47887 323 aa12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 GFRA1P56159 465 aa12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 TLE1Q04724 770 aa12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 NPTX1Q15818 432 aa12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 ZSCAN26Q16670 478 aa12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 IFI44LQ53G44 452 aa12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 SLC25A53Q5H9E4 307 aa12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 MTX3Q5HYI7 312 aa12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 WBP2NLQ6ICG8 309 aa12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 LCN8Q6JVE9 175 aa12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 AAGABQ6PD74 315 aa12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 ENPP6Q6UWR7 440 aa12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 GFRALQ6UXV0 394 aa12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 GTPBP8Q8N3Z3 284 aaPredicted RBP12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 MRGPRX4Q96LA9 322 aa12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 LRGUKQ96M69 825 aa12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 MCHR1Q99705 422 aa12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 ZNF559Q9BR84 538 aa12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 TRIM15Q9C019 465 aa12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 SPRR3Q9UBC9 169 aa12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 TESQ9UGI8 421 aaKnown RBP12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 SLC7A8Q9UHI5 535 aa12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 POMPQ9Y244 141 aa12.74□□□□□ -0.37
APOBEC3B-202ENST00000335760 SMG1Q96Q15 3661 aaKnown RBP12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 ETV2O00321 342 aaPredicted RBP12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 NTN1O95631 604 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 ACTL6AO96019 429 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 BMP7P18075 431 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 CHMP24386 653 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 HTR2AP28223 471 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 SLC1A3P43003 542 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 MERTKQ12866 999 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 OR1Q1Q15612 314 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 ARHGAP11AQ6P4F7 1023 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 POMZP3Q6PJE2 187 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 PLEKHM3Q6ZWE6 761 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 GRINAQ7Z429 371 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 FGD2Q7Z6J4 655 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 FAM86B1Q8N7N1 296 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 GEMIN6Q8WXD5 167 aaKnown RBP12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 ABTB1Q969K4 478 aaPredicted RBP12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 PYURFQ96I23 114 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 TRIM2Q9C040 744 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 TMEM27Q9HBJ8 222 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 CTPS2Q9NRF8 586 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 TNFRSF10DQ9UBN6 386 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 RPS6KB2Q9UBS0 482 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 PRDM4Q9UKN5 801 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 ZNF337Q9Y3M9 751 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 COL6A6A6NMZ7 2263 aa12.73□□□□□ -0.37
APOBEC3B-202ENST00000335760 SPTA1P02549 2419 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 TCRBV5S2A0A599 114 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 CPSF4LA6NMK7 179 aaKnown RBP12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 NPIPA2E9PIF3 369 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 NPIPA3F8WFD2 350 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 H3BML4 177 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 LINC01387J3KSC0 135 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 FMO6PO60774 539 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 PSMA4P25789 261 aaKnown RBP12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 ADH6P28332 368 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 TACR3P29371 465 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 APOBEC1P41238 236 aaKnown RBP12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 HTR3AP46098 478 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 STARP49675 285 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 POLR2HP52434 150 aaKnown RBP12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 DLX5P56178 289 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 KCNC4Q03721 635 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 CRYZQ08257 329 aaKnown RBP12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 C19orf57Q0VDD7 668 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 FLOT2Q14254 428 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 NHSL2Q5HYW2 709 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 ENTPD8Q5MY95 495 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 DCST1Q5T197 706 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 VASNQ6EMK4 673 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 DEF8Q6ZN54 512 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 LSMEM1Q8N8F7 131 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 ST6GALNAC3Q8NDV1 305 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 ATP6V1C2Q8NEY4 427 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 SMPDL3BQ92485 455 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 UTP4Q969X6 686 aaKnown RBP12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 MIB2Q96AX9 1013 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 SARAFQ96BY9 339 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 TIMP4Q99727 224 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 UGT2B28Q9BY64 529 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 AMBRA1Q9C0C7 1298 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 ADAM19Q9H013 955 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 SERINC1Q9NRX5 453 aa12.72□□□□□ -0.37
APOBEC3B-202ENST00000335760 SHANK1Q9Y566 2161 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 TMED7-TICAM2A0A0A6YYA0 188 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 A0A1B0GWA3 101 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 OR14I1A6ND48 311 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 EFNA2O43921 213 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 CIB2O75838 187 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 OPN1LWP04000 364 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 IFNW1P05000 195 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 PEPDP12955 493 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 CCNA2P20248 432 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 POU3F2P20265 443 aaPredicted RBP12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 IL11P20809 199 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 ELK4P28324 431 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms