RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 BDH2Q9BUT1 245 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 FNDC11Q9BVV2 318 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 SAMHD1Q9Y3Z3 626 aaKnown RBP19.54■□□□□ 0.72
TPM1-204ENST00000334895 GNGT2O14610 69 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 PEX1O43933 1283 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 HMGA2P52926 109 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 SESN3P58005 492 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 LINC00303Q3SY05 128 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 WBP2NLQ6ICG8 309 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 WDR88Q6ZMY6 472 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 NR4A3Q92570 626 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 C1GALT1C1Q96EU7 318 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 ABHD17AQ96GS6 310 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 BARD1Q99728 777 aaKnown RBP19.54■□□□□ 0.72
TPM1-204ENST00000334895 PRSS27Q9BQR3 290 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 REEP1Q9H902 201 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 MED17Q9NVC6 651 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 TAS2R10Q9NYW0 307 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 SLC7A7Q9UM01 511 aa19.54■□□□□ 0.72
TPM1-204ENST00000334895 KLF13Q9Y2Y9 288 aaPredicted RBP19.54■□□□□ 0.72
TPM1-204ENST00000334895 TRBV4-1A0A0J9YWV2 114 aa19.53■□□□□ 0.72
TPM1-204ENST00000334895 A0A1W2PRQ8 180 aa19.53■□□□□ 0.72
TPM1-204ENST00000334895 GADD45GO95257 159 aa19.53■□□□□ 0.72
TPM1-204ENST00000334895 RFPL3SP0C7P2 107 aa19.53■□□□□ 0.72
TPM1-204ENST00000334895 UQCRBP14927 111 aa19.53■□□□□ 0.72
TPM1-204ENST00000334895 ELAVL4P26378 380 aaKnown RBP19.53■□□□□ 0.72
TPM1-204ENST00000334895 SLC1A3P43003 542 aa19.53■□□□□ 0.72
TPM1-204ENST00000334895 COPZ1P61923 177 aa19.53■□□□□ 0.72
TPM1-204ENST00000334895 DGCR6Q14129 220 aa19.53■□□□□ 0.72
TPM1-204ENST00000334895 LAPTM4AQ15012 233 aa19.53■□□□□ 0.72
TPM1-204ENST00000334895 EXOC3L2Q2M3D2 409 aa19.53■□□□□ 0.72
TPM1-204ENST00000334895 COLEC12Q5KU26 742 aa19.53■□□□□ 0.72
TPM1-204ENST00000334895 EPHX4Q8IUS5 362 aa19.53■□□□□ 0.72
TPM1-204ENST00000334895 NKAIN4Q8IVV8 208 aa19.53■□□□□ 0.72
TPM1-204ENST00000334895 HS3ST5Q8IZT8 346 aa19.53■□□□□ 0.72
TPM1-204ENST00000334895 ICA1LQ8NDH6 482 aa19.53■□□□□ 0.72
TPM1-204ENST00000334895 ZNF563Q8TA94 476 aa19.53■□□□□ 0.72
TPM1-204ENST00000334895 NRG4Q8WWG1 115 aa19.53■□□□□ 0.72
TPM1-204ENST00000334895 ADAM19Q9H013 955 aa19.53■□□□□ 0.72
TPM1-204ENST00000334895 LHX6Q9UPM6 363 aa19.53■□□□□ 0.72
TPM1-204ENST00000334895 VDAC3Q9Y277 283 aa19.53■□□□□ 0.72
TPM1-204ENST00000334895 MAGED1Q9Y5V3 778 aaPredicted RBP19.53■□□□□ 0.72
TPM1-204ENST00000334895 SAC3D1A6NKF1 404 aa19.52■□□□□ 0.72
TPM1-204ENST00000334895 TNFRSF11BO00300 401 aa19.52■□□□□ 0.72
TPM1-204ENST00000334895 ETV2O00321 342 aaPredicted RBP19.52■□□□□ 0.72
TPM1-204ENST00000334895 PRKCAP17252 672 aa19.52■□□□□ 0.72
TPM1-204ENST00000334895 DLX5P56178 289 aa19.52■□□□□ 0.72
TPM1-204ENST00000334895 LSM11P83369 360 aaKnown RBP eCLIP19.52■□□□□ 0.72
TPM1-204ENST00000334895 ST3GAL3Q11203 375 aa19.52■□□□□ 0.72
TPM1-204ENST00000334895 SEC23BQ15437 767 aa19.52■□□□□ 0.72
TPM1-204ENST00000334895 PLPPR5Q32ZL2 321 aa19.52■□□□□ 0.72
TPM1-204ENST00000334895 ZADH2Q8N4Q0 377 aa19.52■□□□□ 0.72
TPM1-204ENST00000334895 SLC7A13Q8TCU3 470 aa19.52■□□□□ 0.72
TPM1-204ENST00000334895 TM9SF4Q92544 642 aa19.52■□□□□ 0.72
TPM1-204ENST00000334895 EPYCQ99645 322 aa19.52■□□□□ 0.72
TPM1-204ENST00000334895 UBQLN3Q9H347 655 aa19.52■□□□□ 0.72
TPM1-204ENST00000334895 ZFP64Q9NPA5 681 aa19.52■□□□□ 0.72
TPM1-204ENST00000334895 C15orf41Q9Y2V0 281 aa19.52■□□□□ 0.72
TPM1-204ENST00000334895 PCDHGB7Q9Y5F8 929 aa19.52■□□□□ 0.72
TPM1-204ENST00000334895 TRAV17A0A0B4J275 112 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 CASQ2O14958 399 aaPredicted RBP19.51■□□□□ 0.71
TPM1-204ENST00000334895 CHP2O43745 196 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 THRBP10828 461 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 DNAJA1P31689 397 aaKnown RBP19.51■□□□□ 0.71
TPM1-204ENST00000334895 RFC3P40938 356 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 MEOX1P50221 254 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 FOXK1P85037 733 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 TRAM2Q15035 370 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 ALG10BQ5I7T1 473 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 FGD3Q5JSP0 725 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 ULK3Q6PHR2 472 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 ATG4DQ86TL0 474 aaPredicted RBP19.51■□□□□ 0.71
TPM1-204ENST00000334895 RBMXL3Q8N7X1 1067 aaKnown RBP19.51■□□□□ 0.71
TPM1-204ENST00000334895 TMEM178AQ8NBL3 297 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 PTGES2Q9H7Z7 377 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 RPS6KB2Q9UBS0 482 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 OAZ3Q9UMX2 235 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 BOKQ9UMX3 212 aaPredicted RBP19.51■□□□□ 0.71
TPM1-204ENST00000334895 PCDHGB6Q9Y5F9 930 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 SHISA8B8ZZ34 492 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 E2F6O75461 281 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 CBR3O75828 277 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 GP1BBP13224 206 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 FPR1P21462 350 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 PEX2P28328 305 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 TACR3P29371 465 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 FOXF1Q12946 379 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 TRIP10Q15642 601 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 LPCAT4Q643R3 524 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 PODNL1Q6PEZ8 512 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 TBPL2Q6SJ96 375 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 LINC00114Q6XXX2 140 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.51■□□□□ 0.71
TPM1-204ENST00000334895 POC1BQ8TC44 478 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 DNAJA4Q8WW22 397 aaPredicted RBP19.51■□□□□ 0.71
TPM1-204ENST00000334895 ST8SIA1Q92185 356 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 SLC38A4Q969I6 547 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 ALPK1Q96QP1 1244 aa19.51■□□□□ 0.71
TPM1-204ENST00000334895 ANKRD19PQ9H560 264 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms