RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 PARK7Q99497 189 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 UNC93B1Q9H1C4 597 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 SLC6A14Q9UN76 642 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 EXOSC1Q9Y3B2 195 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 PQLC2LA1A4F0 135 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 SCO1O75880 301 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 COL6A2P12110 1019 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 RBMS1P29558 406 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 COILP38432 576 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 AMTP48728 403 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 PSMB3P49720 205 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 LTC4SQ16873 150 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 POM121L1PQ3SYA9 428 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 CDONQ4KMG0 1287 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 STPG2Q8N412 459 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR10P1Q8NGE3 313 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNRF4Q8WWF5 429 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 RNF166Q96A37 237 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 CRISPLD2Q9H0B8 497 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF302Q9NR11 478 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 PCDHA9Q9Y5H5 950 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF814B7Z6K7 855 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 TNFSF15O95150 251 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 USP17L7P0C7H9 530 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 CKMT1AP12532 417 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 NME1P15531 152 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 ADRA2CP18825 462 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 GABRA3P34903 492 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 TMEM267Q0VDI3 215 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 DUSP4Q13115 394 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 GPR33Q49SQ1 333 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 PAGE3Q5JUK9 113 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 LRRC28Q86X40 367 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZBTB34Q8NCN2 500 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 BCL2L2Q92843 193 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 YIPF5Q969M3 257 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 TAAR1Q96RJ0 339 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 ST6GALNAC5Q9BVH7 336 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 BABAM2Q9NXR7 383 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 TESQ9UGI8 421 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 USP22Q9UPT9 525 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 A0A1B0GV90 55 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 ARPC5O15511 151 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 TFPTP0C1Z6 253 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 FMO4P31512 558 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR1D4P47884 311 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 MAN2A2P49641 1150 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 AKR1C1Q04828 323 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR2T2Q6IF00 324 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF585AQ6P3V2 769 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 ADGRG3Q86Y34 549 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 CHST4Q8NCG5 386 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 FAM151AQ8WW52 585 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 TOE1Q96GM8 510 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 SENP5Q96HI0 755 aaPredicted RBP5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 PCYOX1Q9UHG3 505 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 KIAA1210Q9ULL0 1709 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 SOBPA7XYQ1 873 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 LY86O95711 162 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 APODP05090 189 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 SPIBQ01892 262 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF74Q16587 644 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 TUSC1Q2TAM9 212 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF684Q5T5D7 378 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 OGFOD2Q6N063 350 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 BTNL3Q6UXE8 466 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 NIT1Q86X76 327 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 PGBD5Q8N414 524 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 LINC00116Q8NCU8 138 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 NUP37Q8NFH4 326 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 NSUN5Q96P11 429 aaKnown RBP5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 ABCG5Q9H222 651 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF726A6NNF4 738 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 SOX15O60248 233 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 RCBTB2O95199 551 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 GJB6O95452 261 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 GH1P01241 217 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 HTR1AP08908 422 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 ACSM4P0C7M7 580 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 PEX2P28328 305 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 ARL4DP49703 201 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 MGAT5BQ3V5L5 792 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 SERGEFQ9UGK8 458 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 LAMTOR2Q9Y2Q5 125 aa5.73□□□□□ -1.49
CDC42BPA-201ENST00000334218 CHST1O43916 411 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 STBD1O95210 358 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 HLA-DQA2P01906 255 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR5AC1P0C628 307 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 NDUFB7P17568 137 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 PTPRAP18433 802 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 HOXD11P31277 338 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 DAP3P51398 398 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 SOX8P57073 446 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 TMEM258P61165 79 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 ST8SIA6P61647 398 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 IRF8Q02556 426 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 ROM1Q03395 351 aa5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 PNRC1Q12796 327 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-201ENST00000334218 KCNH2Q12809 1159 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms