RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 KAT7O95251 611 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 LALBAP00709 142 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 S100A11P31949 105 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 RAB11BQ15907 218 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 AFMIDQ63HM1 303 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 IDO2Q6ZQW0 420 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 FAM83HQ6ZRV2 1179 aaPredicted RBP13.12□□□□□ -0.31
EPHB3-201ENST00000330394 C12orf45Q8N5I9 185 aaPredicted RBP13.12□□□□□ -0.31
EPHB3-201ENST00000330394 OR2L8Q8NGY9 312 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 BIN3Q9NQY0 253 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 EMC3Q9P0I2 261 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 KLHL42Q9P2K6 505 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 EXO1Q9UQ84 846 aaKnown RBP13.12□□□□□ -0.31
EPHB3-201ENST00000330394 H3BQ06 376 aaPredicted RBP13.12□□□□□ -0.31
EPHB3-201ENST00000330394 GMDSO60547 372 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 RGS11O94810 467 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 FUT1P19526 365 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 BMPR1AP36894 532 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 ACTBP60709 375 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 ACTG1P63261 375 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 LTB4RQ15722 352 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 CD276Q5ZPR3 534 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 FAM26EQ8N5C1 309 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 RELL2Q8NC24 303 aaPredicted RBP13.12□□□□□ -0.31
EPHB3-201ENST00000330394 OR13C5Q8NGS8 318 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 DVL3Q92997 716 aaPredicted RBP13.12□□□□□ -0.31
EPHB3-201ENST00000330394 ARL11Q969Q4 196 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 KCTD12Q96CX2 325 aaKnown RBP13.12□□□□□ -0.31
EPHB3-201ENST00000330394 C1GALT1Q9NS00 363 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 MAN2C1Q9NTJ4 1040 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 KCMF1Q9P0J7 381 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 hCG_1807616A0A1W2PRN6 198 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 HBQ1P09105 142 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 TEAD1P28347 426 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 RBMXP38159 391 aaKnown RBP13.12□□□□□ -0.31
EPHB3-201ENST00000330394 MTNR1BP49286 362 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 PUS10Q3MIT2 529 aaKnown RBP13.12□□□□□ -0.31
EPHB3-201ENST00000330394 ZBTB37Q5TC79 503 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 ZNF322Q6U7Q0 402 aaPredicted RBP13.12□□□□□ -0.31
EPHB3-201ENST00000330394 ZNF550Q7Z398 422 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 TPRA1Q86W33 373 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 BBS1Q8NFJ9 593 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 C20orf85Q9H1P6 137 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 UBQLN3Q9H347 655 aa13.12□□□□□ -0.31
EPHB3-201ENST00000330394 SIDT1Q9NXL6 827 aaKnown RBP13.12□□□□□ -0.31
EPHB3-201ENST00000330394 AHDC1Q5TGY3 1603 aaPredicted RBP13.12□□□□□ -0.31
EPHB3-201ENST00000330394 RORAP35398 523 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 GXYLT1Q4G148 440 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 TMEM35AQ53FP2 167 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 FAM209AQ5JX71 171 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 C1orf189Q5VU69 101 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 YOD1Q5VVQ6 348 aaPredicted RBP13.11□□□□□ -0.31
EPHB3-201ENST00000330394 SLC38A6Q8IZM9 456 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 APH1BQ8WW43 257 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 ORAI1Q96D31 301 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 NEURL3Q96EH8 262 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 GLIPR2Q9H4G4 154 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 RPS10P5Q9NQ39 176 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 HINT3Q9NQE9 182 aaKnown RBP13.11□□□□□ -0.31
EPHB3-201ENST00000330394 HCFC1R1Q9NWW0 138 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 SLC6A14Q9UN76 642 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 SLC6A5Q9Y345 797 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 BACE2Q9Y5Z0 518 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 ADAMTSL1Q8N6G6 1762 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 VEGFDO43915 354 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 TIMP2P16035 220 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 HSD11B1P28845 292 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 EXOSC7Q15024 291 aaKnown RBP13.11□□□□□ -0.31
EPHB3-201ENST00000330394 ZNF585AQ6P3V2 769 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 TSSK4Q6SA08 328 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 OR2AJ1Q8NGZ0 328 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 NOX4Q9NPH5 578 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 ZNF701Q9NV72 531 aaPredicted RBP13.11□□□□□ -0.31
EPHB3-201ENST00000330394 SLC35A3Q9Y2D2 325 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 SLC45A1Q9Y2W3 748 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 MED16Q9Y2X0 877 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 CCDC88CQ9P219 2028 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 A0A1W2PQ45 241 aaPredicted RBP13.11□□□□□ -0.31
EPHB3-201ENST00000330394 A0A1W2PQY0 241 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 TMEM129A0AVI4 362 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 SNAPC5O75971 98 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 MAKP20794 623 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 HCCSP53701 268 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 CLDN20P56880 219 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 ELOAQ14241 798 aaKnown RBP13.11□□□□□ -0.31
EPHB3-201ENST00000330394 DECR1Q16698 335 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 FAM71E1Q6IPT2 247 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 HEPHL1Q6MZM0 1159 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 KCTD18Q6PI47 426 aaPredicted RBP13.11□□□□□ -0.31
EPHB3-201ENST00000330394 UNQ6126/PRO20091Q6UXV3 157 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 NDUFAF7Q7L592 441 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 TMEFF1Q8IYR6 380 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 CNTNAP3BQ96NU0 1288 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 TNFRSF13CQ96RJ3 184 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 CHST8Q9H2A9 424 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 PDFQ9HBH1 243 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 TMEM184CQ9NVA4 438 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 HRASLS2Q9NWW9 162 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 TAAR2Q9P1P5 351 aa13.11□□□□□ -0.31
EPHB3-201ENST00000330394 HRH3Q9Y5N1 445 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms