RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 SNRPD2P62316 118 aaKnown RBP12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 C2orf80Q0P641 193 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 STX5Q13190 355 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 RNPS1Q15287 305 aaKnown RBP12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 TRIP10Q15642 601 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 PRICKLE4Q2TBC4 344 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 SH2D4BQ5SQS7 431 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 HHATQ5VTY9 493 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 CLEC6AQ6EIG7 209 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 NOXRED1Q6NXP6 359 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 RNF165Q6ZSG1 346 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 IKBIPQ70UQ0 350 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 SLC46A3Q7Z3Q1 461 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 C1QL4Q86Z23 238 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 TEX29Q8N6K0 151 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 RNF128Q8TEB7 428 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 EXOSC8Q96B26 276 aaKnown RBP12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 ZBTB8AQ96BR9 441 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 ERP27Q96DN0 273 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 MECRQ9BV79 373 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 EBPLQ9BY08 206 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 MMP27Q9H306 513 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 MAT2BQ9NZL9 334 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 PRODH2Q9UF12 536 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 ZNF639Q9UID6 485 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 CES1P1Q9UKY3 287 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 TMED5Q9Y3A6 229 aa12.92□□□□□ -0.34
CTHRC1-201ENST00000330295 CCT8L1PA6NM43 557 aa12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 HSPA4LO95757 839 aa12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 CBX7O95931 251 aa12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 BCL10O95999 233 aa12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 OPN1LWP04000 364 aa12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 SERPINE1P05121 402 aa12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 PGCP20142 388 aa12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 DDCP20711 480 aa12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 MAPK1P28482 360 aa12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 GCH1P30793 250 aa12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 NTSP30990 170 aa12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 EMDP50402 254 aa12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 PNLIPRP2P54317 469 aa12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 RAE1P78406 368 aaKnown RBP12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 IL13RA1P78552 427 aa12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 KANK2Q63ZY3 851 aa12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 HBMQ6B0K9 141 aa12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 OR52R1Q8NGF1 315 aa12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 PPP3R2Q96LZ3 170 aa12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 FKRPQ9H9S5 495 aa12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 SLC35C2Q9NQQ7 365 aa12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 SDHAF3Q9NRP4 125 aa12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 ARGLU1Q9NWB6 273 aaPredicted RBP12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 PPIAL4AQ9Y536 164 aa12.91□□□□□ -0.34
CTHRC1-201ENST00000330295 TMEM114B3SHH9 223 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 NPIPB8E9PQR5 432 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 M0R1B8 84 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 SLITRK5O94991 958 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 CHRNGP07510 517 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 LINC00032P0C843 101 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 COX5AP20674 150 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 PRPH2P23942 346 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 ASMTP46597 345 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 MLC1Q15049 377 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 ZNF239Q16600 458 aaKnown RBP12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 C1orf229Q6ZS94 237 aaPredicted RBP12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 ZCCHC23Q6ZST2 131 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 ESPNLQ6ZVH7 1005 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 CCDC116Q8IYX3 515 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 FAM9CQ8IZT9 166 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 BPIFB2Q8N4F0 458 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 OR52N5Q8NH56 324 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 FAM110BQ8TC76 370 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 TWIST2Q8WVJ9 160 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 EFHD2Q96C19 240 aaPredicted RBP12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 REXO5Q96IC2 774 aaKnown RBP12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 PKNOX2Q96KN3 472 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 PAIP2Q9BPZ3 127 aaKnown RBP12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 GP6Q9HCN6 339 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 NKIRAS1Q9NYS0 192 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 PRSS50Q9UI38 385 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 POLR3HQ9Y535 204 aaPredicted RBP12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 DNAJC15Q9Y5T4 150 aa12.9□□□□□ -0.34
CTHRC1-201ENST00000330295 LOC105371242A0A075B767 164 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 A0A0J9YW62 118 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 WDR91A4D1P6 747 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 PIN1P1O15428 100 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 MSMBP08118 114 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 CT45A8P0DMV1 189 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 CT45A9P0DMV2 189 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 DAOP14920 347 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 ZNF17P17021 662 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 IGHV1-2P23083 117 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 ETV4P43268 484 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 OR3A2P47893 321 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 CORO7P57737 925 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 PSPHP78330 225 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 MRPS22P82650 360 aaKnown RBP12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 CHRNEQ04844 493 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 CHI3L2Q15782 390 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 ATP6AP1LQ52LC2 224 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 CT45A2Q5DJT8 189 aa12.89□□□□□ -0.35
CTHRC1-201ENST00000330295 BEND6Q5SZJ8 279 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms