RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 FUZQ9BT04 418 aa15.03■□□□□ -0
PDLIM1-201ENST00000329399 RSPO3Q9BXY4 272 aaPredicted RBP15.03■□□□□ -0
PDLIM1-201ENST00000329399 MRPS26Q9BYN8 205 aaKnown RBP15.03■□□□□ -0
PDLIM1-201ENST00000329399 KLHL1Q9NR64 748 aa15.03■□□□□ -0
PDLIM1-201ENST00000329399 BLOC1S6Q9UL45 172 aa15.03■□□□□ -0
PDLIM1-201ENST00000329399 SLC35A3Q9Y2D2 325 aa15.03■□□□□ -0
PDLIM1-201ENST00000329399 PTPN13Q12923 2485 aa15.03■□□□□ -0
PDLIM1-201ENST00000329399 TRAV17A0A0B4J275 112 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 GXYLT2A0PJZ3 443 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 SH3PXD2BA1X283 911 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 E9PQ18 207 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 NPIPB9F8W1W9 429 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 H3BNH8 94 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 M0R3H8 397 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 WWP2O00308 870 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 BCKDKO14874 412 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 ITGA10O75578 1167 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 CYP7B1O75881 506 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 OR2J2O76002 312 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 IL33O95760 270 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 TUBA4AP68366 448 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 RNF4P78317 190 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 TEKQ02763 1124 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 PPP1R8Q12972 351 aaKnown RBP15.02■□□□□ -0
PDLIM1-201ENST00000329399 GANABQ14697 944 aaKnown RBP15.02■□□□□ -0
PDLIM1-201ENST00000329399 ZNF691Q5VV52 312 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 ZNF770Q6IQ21 691 aaPredicted RBP15.02■□□□□ -0
PDLIM1-201ENST00000329399 FIGNL1Q6PIW4 674 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 ZNF836Q6ZNA1 936 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 MDGA2Q7Z553 956 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 C9orf40Q8IXQ3 194 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 RNF113BQ8IZP6 322 aaKnown RBP15.02■□□□□ -0
PDLIM1-201ENST00000329399 OR4D11Q8NGI4 311 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 OR52J3Q8NH60 311 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 HDAC2Q92769 488 aaKnown RBP15.02■□□□□ -0
PDLIM1-201ENST00000329399 HRASLS5Q96KN8 279 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 MUS81Q96NY9 551 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 MCHR1Q99705 422 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 UTP23Q9BRU9 249 aaKnown RBP15.02■□□□□ -0
PDLIM1-201ENST00000329399 ITPAQ9BY32 194 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 HHATLQ9HCP6 504 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 UBQLN4Q9NRR5 601 aa15.02■□□□□ -0
PDLIM1-201ENST00000329399 NDRG4Q9ULP0 352 aaKnown RBP15.02■□□□□ -0
PDLIM1-201ENST00000329399 DOPEY2Q9Y3R5 2298 aa15.02□□□□□ -0.01
PDLIM1-201ENST00000329399 NINQ8N4C6 2090 aa15.02□□□□□ -0.01
PDLIM1-201ENST00000329399 C2orf92A0A1B0GVN3 265 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 HTR3EA5X5Y0 456 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 TRIM64A6NGJ6 449 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 ZFAND5O76080 213 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 NGFRP08138 427 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 KRT20P35900 424 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 UGT2B15P54855 530 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 CXCR4P61073 352 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 MYBPC1Q00872 1141 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 ALDH6A1Q02252 535 aaKnown RBP15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 OC90Q02509 493 aaPredicted RBP15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 PIN1Q13526 163 aaPredicted RBP15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 FGFBP1Q14512 234 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 ZNF766Q5HY98 468 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 FGD3Q5JSP0 725 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 CCNJQ5T5M9 372 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 MRPL2Q5T653 305 aaKnown RBP15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 ZNF324BQ6AW86 544 aaPredicted RBP15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 ZNF613Q6PF04 617 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 NPSR1Q6W5P4 371 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 HSDL2Q6YN16 418 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 RRM2BQ7LG56 351 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 LACC1Q8IV20 430 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 DEPDC4Q8N2C3 294 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 CLIP4Q8N3C7 705 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 BCORP1Q8N888 145 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 DIO2Q92813 273 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 ADIPOR1Q96A54 375 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 TRIM2Q9C040 744 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 QRSL1Q9H0R6 528 aaKnown RBP15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 NDUFA13Q9P0J0 144 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 LRFN1Q9P244 771 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 MYOTQ9UBF9 498 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 GMPPBQ9Y5P6 360 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 TRAPPC13A5PLN9 417 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 MPZL2O60487 215 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 NME6O75414 186 aaPredicted RBP15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 OR6B1O95007 311 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 GNAO1P09471 354 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 MST1P26927 711 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 HLCSP50747 726 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 NPTX1Q15818 432 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 EIF2S3LQ2VIR3 472 aaKnown RBP15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 ENTPD8Q5MY95 495 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 RPUSD3Q6P087 351 aaKnown RBP15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 C1orf94Q6P1W5 598 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 PLEKHM3Q6ZWE6 761 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 RBM45Q8IUH3 476 aaKnown RBP15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 OR5L2Q8NGL0 311 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 NUBPLQ8TB37 319 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 SLC7A13Q8TCU3 470 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 FBLIM1Q8WUP2 373 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 ACOT11Q8WXI4 607 aaPredicted RBP15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 HS6ST2Q96MM7 605 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 UCK2Q9BZX2 261 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms