RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 RNGTTO60942 597 aaKnown RBP16.09■□□□□ 0.17
PTP4A3-201ENST00000329397 PRR23D2P0DMB1 279 aaPredicted RBP16.09■□□□□ 0.17
PTP4A3-201ENST00000329397 GIFP27352 417 aa16.09■□□□□ 0.17
PTP4A3-201ENST00000329397 PLAURQ03405 335 aa16.09■□□□□ 0.17
PTP4A3-201ENST00000329397 RIN1Q13671 783 aa16.09■□□□□ 0.17
PTP4A3-201ENST00000329397 PDGFRLQ15198 375 aa16.09■□□□□ 0.17
PTP4A3-201ENST00000329397 ZNF425Q6IV72 752 aa16.09■□□□□ 0.17
PTP4A3-201ENST00000329397 OAFQ86UD1 273 aa16.09■□□□□ 0.17
PTP4A3-201ENST00000329397 OR11H4Q8NGC9 324 aa16.09■□□□□ 0.17
PTP4A3-201ENST00000329397 CREB3L1Q96BA8 519 aa16.09■□□□□ 0.17
PTP4A3-201ENST00000329397 MED28Q9H204 178 aa16.09■□□□□ 0.17
PTP4A3-201ENST00000329397 MEPEQ9NQ76 525 aaPredicted RBP16.09■□□□□ 0.17
PTP4A3-201ENST00000329397 THAP10Q9P2Z0 257 aaPredicted RBP16.09■□□□□ 0.17
PTP4A3-201ENST00000329397 MPDZO75970 2070 aa16.08■□□□□ 0.17
PTP4A3-201ENST00000329397 LAMA1P25391 3075 aa16.08■□□□□ 0.17
PTP4A3-201ENST00000329397 IMPA2O14732 288 aa16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 CTSVO60911 334 aa16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 FZD7O75084 574 aa16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 ZNF85Q03923 595 aa16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 SGCGQ13326 291 aa16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 GALEQ14376 348 aa16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 TMEM52Q8NDY8 209 aa16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 OR10G6Q8NH81 332 aa16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 BPIFA2Q96DR5 249 aa16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 GTPBP2Q9BX10 602 aaKnown RBP16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 FN3KQ9H479 309 aa16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 CACYBPQ9HB71 228 aaKnown RBP16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 GXYLT2A0PJZ3 443 aa16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 TRAPPC13A5PLN9 417 aa16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 NAGAP17050 411 aa16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 CTRB1P17538 263 aa16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 NAA10P41227 235 aaPredicted RBP16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 OR3A3P47888 321 aa16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 CEBPEQ15744 281 aa16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 GXYLT1Q4G148 440 aa16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 CTRB2Q6GPI1 263 aa16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 GID4Q8IVV7 300 aa16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 GHSRQ92847 366 aa16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 ZMYND19Q96E35 227 aaPredicted RBP16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 NDC1Q9BTX1 674 aa16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 UCKL1Q9NWZ5 548 aa16.08■□□□□ 0.16
PTP4A3-201ENST00000329397 POM121BA6NF01 834 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 DUXAA6NLW8 204 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 LRRN3E7EW58 273 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 PSMD9O00233 223 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 ADAM11O75078 769 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 LAMP2P13473 410 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 DRD5P21918 477 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 AHCYP23526 432 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 ACSL1P33121 698 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 MAGEB1P43366 347 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 PRMT2P55345 433 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 TNFRSF17Q02223 184 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 ACSM3Q53FZ2 586 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 RANBP3LQ86VV4 465 aaPredicted RBP16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 LIX1LQ8IVB5 337 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 OR4K14Q8NGD5 310 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 SMARCD2Q92925 531 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 PMEPA1Q969W9 287 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 LRRN3Q9H3W5 708 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 IL21RQ9HBE5 538 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 ADGRL4Q9HBW9 690 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 NKIRAS2Q9NYR9 191 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 MGAT4AQ9UM21 535 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 A0A1W2PQ72 361 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 MT-ND5P03915 603 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 PEPDP12955 493 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 PVRP15151 417 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 TMEM44Q2T9K0 475 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 DCST2Q5T1A1 773 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 ASPGQ86U10 573 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 SIAH3Q8IW03 269 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 ZNF655Q8N720 491 aaPredicted RBP16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 BRIX1Q8TDN6 353 aaKnown RBP16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 SMPDL3BQ92485 455 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 PGLYRP3Q96LB9 341 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 KCMF1Q9P0J7 381 aa16.07■□□□□ 0.16
PTP4A3-201ENST00000329397 HEATR5AQ86XA9 2040 aa16.06■□□□□ 0.16
PTP4A3-201ENST00000329397 MT-ND4P03905 459 aa16.06■□□□□ 0.16
PTP4A3-201ENST00000329397 ADRB1P08588 477 aa16.06■□□□□ 0.16
PTP4A3-201ENST00000329397 SBK2P0C263 348 aa16.06■□□□□ 0.16
PTP4A3-201ENST00000329397 ATF1P18846 271 aa16.06■□□□□ 0.16
PTP4A3-201ENST00000329397 NT5EP21589 574 aa16.06■□□□□ 0.16
PTP4A3-201ENST00000329397 CFL1P23528 166 aaKnown RBP16.06■□□□□ 0.16
PTP4A3-201ENST00000329397 NDUFS1P28331 727 aa16.06■□□□□ 0.16
PTP4A3-201ENST00000329397 SSTR2P30874 369 aa16.06■□□□□ 0.16
PTP4A3-201ENST00000329397 ARHGAP11BQ3KRB8 267 aa16.06■□□□□ 0.16
PTP4A3-201ENST00000329397 SLC36A2Q495M3 483 aa16.06■□□□□ 0.16
PTP4A3-201ENST00000329397 FBXO42Q6P3S6 717 aa16.06■□□□□ 0.16
PTP4A3-201ENST00000329397 ELMOD2Q8IZ81 293 aa16.06■□□□□ 0.16
PTP4A3-201ENST00000329397 OR2L13Q8N349 312 aa16.06■□□□□ 0.16
PTP4A3-201ENST00000329397 LNX2Q8N448 690 aa16.06■□□□□ 0.16
PTP4A3-201ENST00000329397 COX18Q8N8Q8 333 aa16.06■□□□□ 0.16
PTP4A3-201ENST00000329397 SRFBP1Q8NEF9 429 aaKnown RBP16.06■□□□□ 0.16
PTP4A3-201ENST00000329397 SDR9C7Q8NEX9 313 aa16.06■□□□□ 0.16
PTP4A3-201ENST00000329397 ZNF559Q9BR84 538 aa16.06■□□□□ 0.16
PTP4A3-201ENST00000329397 TIMM29Q9BSF4 260 aa16.06■□□□□ 0.16
PTP4A3-201ENST00000329397 GSDMCQ9BYG8 508 aa16.06■□□□□ 0.16
PTP4A3-201ENST00000329397 AUNIPQ9H7T9 357 aa16.06■□□□□ 0.16
PTP4A3-201ENST00000329397 SLCO1C1Q9NYB5 712 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms