RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 GNA13Q14344 377 aa24.73■■□□□ 1.55
ATPAF1-201ENST00000329231 DAZAP2Q15038 168 aaPredicted RBP24.73■■□□□ 1.55
ATPAF1-201ENST00000329231 GTDC1Q4AE62 458 aa24.73■■□□□ 1.55
ATPAF1-201ENST00000329231 C3orf33Q6P1S2 294 aa24.73■■□□□ 1.55
ATPAF1-201ENST00000329231 BLOC1S3Q6QNY0 202 aa24.73■■□□□ 1.55
ATPAF1-201ENST00000329231 THOC1Q96FV9 657 aaKnown RBP24.73■■□□□ 1.55
ATPAF1-201ENST00000329231 SLC39A3Q9BRY0 314 aa24.73■■□□□ 1.55
ATPAF1-201ENST00000329231 OPN3Q9H1Y3 402 aaPredicted RBP24.73■■□□□ 1.55
ATPAF1-201ENST00000329231 NPHS2Q9NP85 383 aa24.73■■□□□ 1.55
ATPAF1-201ENST00000329231 SERINC1Q9NRX5 453 aa24.73■■□□□ 1.55
ATPAF1-201ENST00000329231 ACER3Q9NUN7 267 aa24.73■■□□□ 1.55
ATPAF1-201ENST00000329231 A6NNC1 897 aa24.72■■□□□ 1.55
ATPAF1-201ENST00000329231 SS18L1O75177 396 aaPredicted RBP24.72■■□□□ 1.55
ATPAF1-201ENST00000329231 ETFAP13804 333 aa24.72■■□□□ 1.55
ATPAF1-201ENST00000329231 SLC7A1P30825 629 aa24.72■■□□□ 1.55
ATPAF1-201ENST00000329231 ATP4BP51164 291 aa24.72■■□□□ 1.55
ATPAF1-201ENST00000329231 DSTNP60981 165 aa24.72■■□□□ 1.55
ATPAF1-201ENST00000329231 GUCY1A3Q02108 690 aa24.72■■□□□ 1.55
ATPAF1-201ENST00000329231 SLC2A7Q6PXP3 512 aa24.72■■□□□ 1.55
ATPAF1-201ENST00000329231 CDH24Q86UP0 819 aa24.72■■□□□ 1.55
ATPAF1-201ENST00000329231 FUNDC1Q8IVP5 155 aa24.72■■□□□ 1.55
ATPAF1-201ENST00000329231 OR6K3Q8NGY3 331 aa24.72■■□□□ 1.55
ATPAF1-201ENST00000329231 ZNF563Q8TA94 476 aa24.72■■□□□ 1.55
ATPAF1-201ENST00000329231 AURKBQ96GD4 344 aaPredicted RBP24.72■■□□□ 1.55
ATPAF1-201ENST00000329231 PAIP1Q9H074 479 aaKnown RBP24.72■■□□□ 1.55
ATPAF1-201ENST00000329231 RAD21L1Q9H4I0 556 aa24.72■■□□□ 1.55
ATPAF1-201ENST00000329231 DNAJB12Q9NXW2 375 aaKnown RBP24.72■■□□□ 1.55
ATPAF1-201ENST00000329231 ELOVL5Q9NYP7 299 aa24.72■■□□□ 1.55
ATPAF1-201ENST00000329231 CCDC167Q9P0B6 97 aa24.72■■□□□ 1.55
ATPAF1-201ENST00000329231 PCDHB14Q9Y5E9 798 aa24.72■■□□□ 1.55
ATPAF1-201ENST00000329231 HEATR5AQ86XA9 2040 aa24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 MYO9AB2RTY4 2548 aa24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 FAM221AA4D161 298 aa24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 TMEM247A6NEH6 219 aa24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 CLDN24A6NM45 220 aa24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 BCAS1O75363 584 aaPredicted RBP24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 DBIP07108 87 aaKnown RBP24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 IL7RP16871 459 aa24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 RPS4Y1P22090 263 aaKnown RBP24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 RYKP34925 604 aa24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 CD79BP40259 229 aa24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 MERTKQ12866 999 aa24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 ZNF239Q16600 458 aaKnown RBP24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 ZNF474Q6S9Z5 364 aaPredicted RBP24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 PEX5LQ8IYB4 626 aa24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 WDR60Q8WVS4 1066 aa24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 SPDL1Q96EA4 605 aa24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 DACH2Q96NX9 599 aa24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 GPATCH1Q9BRR8 931 aaKnown RBP24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 POLDIP3Q9BY77 421 aaKnown RBP24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 CCDC134Q9H6E4 229 aa24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 RASSF1Q9NS23 344 aa24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 NDRG3Q9UGV2 375 aa24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 DCTN4Q9UJW0 460 aa24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 CLEC4AQ9UMR7 237 aa24.71■■□□□ 1.55
ATPAF1-201ENST00000329231 A0A096LPI6 279 aa24.7■■□□□ 1.54
ATPAF1-201ENST00000329231 NR5A2O00482 541 aa24.7■■□□□ 1.54
ATPAF1-201ENST00000329231 KCNJ5P48544 419 aa24.7■■□□□ 1.54
ATPAF1-201ENST00000329231 CRISP3P54108 245 aa24.7■■□□□ 1.54
ATPAF1-201ENST00000329231 FAM27E3Q08E93 113 aa24.7■■□□□ 1.54
ATPAF1-201ENST00000329231 SQLEQ14534 574 aa24.7■■□□□ 1.54
ATPAF1-201ENST00000329231 PLEKHM3Q6ZWE6 761 aa24.7■■□□□ 1.54
ATPAF1-201ENST00000329231 ZNF610Q8N9Z0 462 aa24.7■■□□□ 1.54
ATPAF1-201ENST00000329231 ROBO4Q8WZ75 1007 aa24.7■■□□□ 1.54
ATPAF1-201ENST00000329231 SRXN1Q9BYN0 137 aa24.7■■□□□ 1.54
ATPAF1-201ENST00000329231 CLEC4MQ9H2X3 399 aaPredicted RBP24.7■■□□□ 1.54
ATPAF1-201ENST00000329231 RABEP2Q9H5N1 569 aa24.7■■□□□ 1.54
ATPAF1-201ENST00000329231 COQ10BQ9H8M1 238 aa24.7■■□□□ 1.54
ATPAF1-201ENST00000329231 PLSCR4Q9NRQ2 329 aa24.7■■□□□ 1.54
ATPAF1-201ENST00000329231 CSMD1Q96PZ7 3565 aa24.69■■□□□ 1.54
ATPAF1-201ENST00000329231 SH3D21A4FU49 640 aa24.69■■□□□ 1.54
ATPAF1-201ENST00000329231 CLIC1O00299 241 aa24.69■■□□□ 1.54
ATPAF1-201ENST00000329231 GOSR1O95249 250 aa24.69■■□□□ 1.54
ATPAF1-201ENST00000329231 BCHEP06276 602 aa24.69■■□□□ 1.54
ATPAF1-201ENST00000329231 TFPTP0C1Z6 253 aa24.69■■□□□ 1.54
ATPAF1-201ENST00000329231 NID1P14543 1247 aa24.69■■□□□ 1.54
ATPAF1-201ENST00000329231 POU2F1P14859 743 aa24.69■■□□□ 1.54
ATPAF1-201ENST00000329231 APOBEC1P41238 236 aaKnown RBP24.69■■□□□ 1.54
ATPAF1-201ENST00000329231 RAC3P60763 192 aa24.69■■□□□ 1.54
ATPAF1-201ENST00000329231 RNPS1Q15287 305 aaKnown RBP24.69■■□□□ 1.54
ATPAF1-201ENST00000329231 MAPK11Q15759 364 aa24.69■■□□□ 1.54
ATPAF1-201ENST00000329231 AGKQ53H12 422 aa24.69■■□□□ 1.54
ATPAF1-201ENST00000329231 RNF128Q8TEB7 428 aa24.69■■□□□ 1.54
ATPAF1-201ENST00000329231 SLC25A43Q8WUT9 341 aaPredicted RBP24.69■■□□□ 1.54
ATPAF1-201ENST00000329231 SLC38A5Q8WUX1 472 aa24.69■■□□□ 1.54
ATPAF1-201ENST00000329231 CNOT9Q92600 299 aaKnown RBP24.69■■□□□ 1.54
ATPAF1-201ENST00000329231 SPIN1Q9Y657 262 aaPredicted RBP24.69■■□□□ 1.54
ATPAF1-201ENST00000329231 PDZD2O15018 2839 aa24.68■■□□□ 1.54
ATPAF1-201ENST00000329231 MDH1P40925 334 aaKnown RBP24.68■■□□□ 1.54
ATPAF1-201ENST00000329231 PLAURQ03405 335 aa24.68■■□□□ 1.54
ATPAF1-201ENST00000329231 FADDQ13158 208 aa24.68■■□□□ 1.54
ATPAF1-201ENST00000329231 RGNQ15493 299 aa24.68■■□□□ 1.54
ATPAF1-201ENST00000329231 FCRLAQ7L513 359 aa24.68■■□□□ 1.54
ATPAF1-201ENST00000329231 GRINAQ7Z429 371 aa24.68■■□□□ 1.54
ATPAF1-201ENST00000329231 LURAP1LQ8IV03 231 aa24.68■■□□□ 1.54
ATPAF1-201ENST00000329231 CCDC106Q9BWC9 280 aa24.68■■□□□ 1.54
ATPAF1-201ENST00000329231 FGFR1OP2Q9NVK5 253 aa24.68■■□□□ 1.54
ATPAF1-201ENST00000329231 TRIM33Q9UPN9 1127 aa24.68■■□□□ 1.54
ATPAF1-201ENST00000329231 DSPPQ9NZW4 1301 aa24.67■■□□□ 1.54
ATPAF1-201ENST00000329231 MPDZO75970 2070 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms