RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 OR2T5Q6IEZ7 315 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 CCBE1Q6UXH8 406 aaPredicted RBP11.74□□□□□ -0.53
DDX39A-202ENST00000324340 HSDL2Q6YN16 418 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 HDDC2Q7Z4H3 204 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 VRK2Q86Y07 508 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 CCDC103Q8IW40 242 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 OR2T29Q8NH02 315 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 TMBIM1Q969X1 311 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 LGALS12Q96DT0 336 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 IMMP1LQ96LU5 166 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 GAL3ST4Q96RP7 486 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 MBOAT4Q96T53 435 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 ASCL3Q9NQ33 180 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 MRTO4Q9UKD2 239 aaKnown RBP11.74□□□□□ -0.53
DDX39A-202ENST00000324340 ZNF443Q9Y2A4 671 aaPredicted RBP11.74□□□□□ -0.53
DDX39A-202ENST00000324340 ORC6Q9Y5N6 252 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 ENPP4Q9Y6X5 453 aa11.74□□□□□ -0.53
DDX39A-202ENST00000324340 SPEGQ15772 3267 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 CENPVL1A0A0U1RR11 272 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 TMEM200CA6NKL6 621 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 G3V2T6 193 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 PEX12O00623 359 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 PRKNO60260 465 aaPredicted RBP11.73□□□□□ -0.53
DDX39A-202ENST00000324340 INMTO95050 263 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 RHCEP18577 417 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 S100A5P33763 92 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 UGT2B15P54855 530 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 PSMD4P55036 377 aaKnown RBP11.73□□□□□ -0.53
DDX39A-202ENST00000324340 OR2B6P58173 313 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 KEAP1Q14145 624 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 LARS2Q15031 903 aaKnown RBP11.73□□□□□ -0.53
DDX39A-202ENST00000324340 EXT1Q16394 746 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 NNATQ16517 81 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 FLYWCH1Q4VC44 716 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 EIPR1Q53HC9 387 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 ATAD3CQ5T2N8 411 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 UBE2UQ5VVX9 321 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 PLAG1Q6DJT9 500 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 DESI1Q6ICB0 168 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 KIRREL2Q6UWL6 708 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 ZNF836Q6ZNA1 936 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 ZNF767PQ75MW2 155 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 PPP1R32Q7Z5V6 425 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 ZNF605Q86T29 641 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 DTX1Q86Y01 620 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 MARCH9Q86YJ5 346 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 HIPK1Q86Z02 1210 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 KBTBD8Q8NFY9 601 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 OR11G2Q8NGC1 345 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 OR4D11Q8NGI4 311 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 OR5K1Q8NHB7 308 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 ELP5Q8TE02 316 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 DIO2Q92813 273 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 SLC38A4Q969I6 547 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 ZHX1-C8orf76Q96EF9 292 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 AIFM2Q9BRQ8 373 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 NRSN2Q9GZP1 204 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 EVA1AQ9H8M9 152 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 CACYBPQ9HB71 228 aaKnown RBP11.73□□□□□ -0.53
DDX39A-202ENST00000324340 ACAD8Q9UKU7 415 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 NUP50Q9UKX7 468 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 SLC9A8Q9Y2E8 581 aa11.73□□□□□ -0.53
DDX39A-202ENST00000324340 LOC100130705A0A1B0GUX0 176 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 CDHR4A6H8M9 788 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 BET1O15155 118 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 ADAMDEC1O15204 470 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 TSPAN2O60636 221 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 SEMA7AO75326 666 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 IL7RP16871 459 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 F8A1P23610 371 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 RBMS1P29558 406 aaKnown RBP11.72□□□□□ -0.53
DDX39A-202ENST00000324340 DLSTP36957 453 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 DCTP40126 519 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 NR0B1P51843 470 aaKnown RBP11.72□□□□□ -0.53
DDX39A-202ENST00000324340 ATP12AP54707 1039 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 SLC35A2P78381 396 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 CDK5R2Q13319 367 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 IKZF1Q13422 519 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 ZSWIM7Q19AV6 140 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 CDONQ4KMG0 1287 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 TIGD3Q6B0B8 471 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 TCTN3Q6NUS6 607 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 TBPL2Q6SJ96 375 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 NDUFAF7Q7L592 441 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 HMGN2P46Q86SG4 172 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 STK32CQ86UX6 486 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 PLCZ1Q86YW0 608 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 SLC34A3Q8N130 599 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 FAM109AQ8N4B1 249 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 OR5L2Q8NGL0 311 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 NDNFQ8TB73 568 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 M1APQ8TC57 530 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 HTRA1Q92743 480 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 NKD1Q969G9 470 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 LMF1Q96S06 567 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 PIP5K1AQ99755 562 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 WFDC6Q9BQY6 131 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 DGCR6LQ9BY27 220 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 GABARAPL1Q9H0R8 117 aa11.72□□□□□ -0.53
DDX39A-202ENST00000324340 MMP25Q9NPA2 562 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms