RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 FGFBP1Q14512 234 aa20.62■□□□□ 0.89
PNKP-201ENST00000322344 INSL4Q14641 139 aa20.62■□□□□ 0.89
PNKP-201ENST00000322344 DEFB110Q30KQ9 67 aa20.62■□□□□ 0.89
PNKP-201ENST00000322344 ATAD3CQ5T2N8 411 aa20.62■□□□□ 0.89
PNKP-201ENST00000322344 MZT2BQ6NZ67 158 aa20.62■□□□□ 0.89
PNKP-201ENST00000322344 CMIPQ8IY22 773 aa20.62■□□□□ 0.89
PNKP-201ENST00000322344 ENKURQ8TC29 256 aa20.62■□□□□ 0.89
PNKP-201ENST00000322344 KCTD12Q96CX2 325 aaKnown RBP20.62■□□□□ 0.89
PNKP-201ENST00000322344 VSTM2LQ96N03 204 aa20.62■□□□□ 0.89
PNKP-201ENST00000322344 ADGRL4Q9HBW9 690 aa20.62■□□□□ 0.89
PNKP-201ENST00000322344 SIRT4Q9Y6E7 314 aaPredicted RBP20.62■□□□□ 0.89
PNKP-201ENST00000322344 GLULP15104 373 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 SSTR4P31391 388 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 SLC16A1P53985 500 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 IL18Q14116 193 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 CRMP1Q14194 572 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 BCL2A1Q16548 175 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 HBMQ6B0K9 141 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 ULK3Q6PHR2 472 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 ZC3H14Q6PJT7 736 aaKnown RBP20.61■□□□□ 0.89
PNKP-201ENST00000322344 LINC00114Q6XXX2 140 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 TOE1Q96GM8 510 aaKnown RBP20.61■□□□□ 0.89
PNKP-201ENST00000322344 ZC3HAV1LQ96H79 300 aaKnown RBP20.61■□□□□ 0.89
PNKP-201ENST00000322344 ART5Q96L15 291 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 PTCHD1Q96NR3 888 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 TNFRSF13CQ96RJ3 184 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 G6PC3Q9BUM1 346 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 MMP28Q9H239 520 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 RNF121Q9H920 327 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 B4DXG7 233 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 IGKV1D-16P01601 117 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 NOS3P29474 1203 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 LTBRP36941 435 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.61■□□□□ 0.89
PNKP-201ENST00000322344 DNAJC5GQ8N7S2 189 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 FRMD6Q96NE9 622 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 OR2B2Q9GZK3 357 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 MCCC2Q9HCC0 563 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 Q9N2J8 555 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 RPS6KB2Q9UBS0 482 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 SERTAD3Q9UJW9 196 aa20.61■□□□□ 0.89
PNKP-201ENST00000322344 ARHGEF17Q96PE2 2063 aaPredicted RBP20.61■□□□□ 0.89
PNKP-201ENST00000322344 A0A0A6YYC8 382 aaPredicted RBP20.6■□□□□ 0.89
PNKP-201ENST00000322344 TTC36A6NLP5 189 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 NPIPB9F8W1W9 429 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 I3L1I5 382 aaPredicted RBP20.6■□□□□ 0.89
PNKP-201ENST00000322344 PRAMEF2O60811 474 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 PRKAR1AP10644 381 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 NR4A2P43354 598 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 MAP2K3P46734 347 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 C1orf61Q13536 156 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 QPRTQ15274 297 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 TPRA1Q86W33 373 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 PARGQ86W56 976 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 AVL9Q8NBF6 648 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 FAM174AQ8TBP5 190 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 SMPDL3BQ92485 455 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 SENP5Q96HI0 755 aaPredicted RBP20.6■□□□□ 0.89
PNKP-201ENST00000322344 ZNF578Q96N58 590 aaPredicted RBP20.6■□□□□ 0.89
PNKP-201ENST00000322344 UBL7Q96S82 380 aaPredicted RBP20.6■□□□□ 0.89
PNKP-201ENST00000322344 CYP8B1Q9UNU6 501 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 CDH23Q9H251 3354 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 TFECO14948 347 aaPredicted RBP20.6■□□□□ 0.89
PNKP-201ENST00000322344 IL9P15248 144 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 MYL9P24844 172 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 GPR143P51810 404 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 ATP12AP54707 1039 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 SLC44A3Q8N4M1 653 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 SMRP1Q8NCR6 262 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 OR4N2Q8NGD1 307 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 KLHDC7BQ96G42 594 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 DGAT2Q96PD7 388 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 TMEM43Q9BTV4 400 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 MKKSQ9NPJ1 570 aaPredicted RBP20.6■□□□□ 0.89
PNKP-201ENST00000322344 PRTFDC1Q9NRG1 225 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 HCN3Q9P1Z3 774 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 KLHL21Q9UJP4 597 aa20.6■□□□□ 0.89
PNKP-201ENST00000322344 EFCAB7A8K855 629 aa20.59■□□□□ 0.89
PNKP-201ENST00000322344 B4DGG1 531 aa20.59■□□□□ 0.89
PNKP-201ENST00000322344 CLDN4O14493 209 aa20.59■□□□□ 0.89
PNKP-201ENST00000322344 CTSBP07858 339 aa20.59■□□□□ 0.89
PNKP-201ENST00000322344 KIR2DL3P43628 341 aa20.59■□□□□ 0.89
PNKP-201ENST00000322344 NKX2-5P52952 324 aaPredicted RBP20.59■□□□□ 0.89
PNKP-201ENST00000322344 ZNF85Q03923 595 aa20.59■□□□□ 0.89
PNKP-201ENST00000322344 CRYZQ08257 329 aaKnown RBP20.59■□□□□ 0.89
PNKP-201ENST00000322344 COL13A1Q5TAT6 717 aaPredicted RBP20.59■□□□□ 0.89
PNKP-201ENST00000322344 ARL9Q6T311 187 aa20.59■□□□□ 0.89
PNKP-201ENST00000322344 VASH1Q7L8A9 365 aaPredicted RBP20.59■□□□□ 0.89
PNKP-201ENST00000322344 OR6C4Q8NGE1 309 aa20.59■□□□□ 0.89
PNKP-201ENST00000322344 TP53INP1Q96A56 240 aa20.59■□□□□ 0.89
PNKP-201ENST00000322344 MSANTD3Q96H12 275 aa20.59■□□□□ 0.89
PNKP-201ENST00000322344 ST6GAL2Q96JF0 529 aa20.59■□□□□ 0.89
PNKP-201ENST00000322344 SNX18Q96RF0 628 aa20.59■□□□□ 0.89
PNKP-201ENST00000322344 RBCK1Q9BYM8 510 aa20.59■□□□□ 0.89
PNKP-201ENST00000322344 RBFOX1Q9NWB1 397 aaKnown RBP20.59■□□□□ 0.89
PNKP-201ENST00000322344 NOX1Q9Y5S8 564 aa20.59■□□□□ 0.89
PNKP-201ENST00000322344 SLC9B1P1A6NJY1 282 aa20.58■□□□□ 0.89
PNKP-201ENST00000322344 FAM25AB3EWG3 89 aa20.58■□□□□ 0.89
PNKP-201ENST00000322344 FAM25CB3EWG5 89 aa20.58■□□□□ 0.89
PNKP-201ENST00000322344 FAM25GB3EWG6 89 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms