RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 SESN3P58005 492 aa15.83■□□□□ 0.12
TPM1-203ENST00000317516 GPAT3Q53EU6 434 aa15.83■□□□□ 0.12
TPM1-203ENST00000317516 C20orf204Q6ZNR8 217 aa15.83■□□□□ 0.12
TPM1-203ENST00000317516 P3H2Q8IVL5 708 aa15.83■□□□□ 0.12
TPM1-203ENST00000317516 TUSC5Q8IXB3 177 aa15.83■□□□□ 0.12
TPM1-203ENST00000317516 ZNF619Q8N2I2 560 aa15.83■□□□□ 0.12
TPM1-203ENST00000317516 RAB3IL1Q8TBN0 382 aa15.83■□□□□ 0.12
TPM1-203ENST00000317516 PANX1Q96RD7 426 aa15.83■□□□□ 0.12
TPM1-203ENST00000317516 USB1Q9BQ65 265 aaKnown RBP15.83■□□□□ 0.12
TPM1-203ENST00000317516 ACTR6Q9GZN1 396 aa15.83■□□□□ 0.12
TPM1-203ENST00000317516 SAP130Q9H0E3 1048 aa15.83■□□□□ 0.12
TPM1-203ENST00000317516 UBTD1Q9HAC8 227 aa15.83■□□□□ 0.12
TPM1-203ENST00000317516 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.83■□□□□ 0.12
TPM1-203ENST00000317516 ACER3Q9NUN7 267 aa15.83■□□□□ 0.12
TPM1-203ENST00000317516 AIG1Q9NVV5 245 aa15.83■□□□□ 0.12
TPM1-203ENST00000317516 LIPT1Q9Y234 373 aa15.83■□□□□ 0.12
TPM1-203ENST00000317516 CCDC154A6NI56 674 aa15.82■□□□□ 0.12
TPM1-203ENST00000317516 SDHDO14521 159 aa15.82■□□□□ 0.12
TPM1-203ENST00000317516 PGRP06401 933 aa15.82■□□□□ 0.12
TPM1-203ENST00000317516 NID1P14543 1247 aa15.82■□□□□ 0.12
TPM1-203ENST00000317516 ENPP1P22413 925 aa15.82■□□□□ 0.12
TPM1-203ENST00000317516 APOBEC1P41238 236 aaKnown RBP15.82■□□□□ 0.12
TPM1-203ENST00000317516 NME5P56597 212 aa15.82■□□□□ 0.12
TPM1-203ENST00000317516 WDR4P57081 412 aaKnown RBP15.82■□□□□ 0.12
TPM1-203ENST00000317516 UFM1P61960 85 aa15.82■□□□□ 0.12
TPM1-203ENST00000317516 MERTKQ12866 999 aa15.82■□□□□ 0.12
TPM1-203ENST00000317516 TYW3Q6IPR3 259 aaKnown RBP15.82■□□□□ 0.12
TPM1-203ENST00000317516 ZNF621Q6ZSS3 439 aa15.82■□□□□ 0.12
TPM1-203ENST00000317516 C22orf34Q6ZV56 151 aa15.82■□□□□ 0.12
TPM1-203ENST00000317516 LRRC75A-AS1Q8N1F1 130 aa15.82■□□□□ 0.12
TPM1-203ENST00000317516 GLB1L3Q8NCI6 653 aaPredicted RBP15.82■□□□□ 0.12
TPM1-203ENST00000317516 ZNF563Q8TA94 476 aa15.82■□□□□ 0.12
TPM1-203ENST00000317516 MGARPQ8TDB4 240 aa15.82■□□□□ 0.12
TPM1-203ENST00000317516 SLC25A43Q8WUT9 341 aaPredicted RBP15.82■□□□□ 0.12
TPM1-203ENST00000317516 MARK4Q96L34 752 aa15.82■□□□□ 0.12
TPM1-203ENST00000317516 OR5B2Q96R09 309 aa15.82■□□□□ 0.12
TPM1-203ENST00000317516 OR52E6Q96RD3 313 aa15.82■□□□□ 0.12
TPM1-203ENST00000317516 COQ10BQ9H8M1 238 aa15.82■□□□□ 0.12
TPM1-203ENST00000317516 SPIN1Q9Y657 262 aaPredicted RBP15.82■□□□□ 0.12
TPM1-203ENST00000317516 SETD2Q9BYW2 2564 aaPredicted RBP15.82■□□□□ 0.12
TPM1-203ENST00000317516 A0A1W2PNR3 127 aa15.81■□□□□ 0.12
TPM1-203ENST00000317516 KLF4O43474 513 aa15.81■□□□□ 0.12
TPM1-203ENST00000317516 THBDP07204 575 aa15.81■□□□□ 0.12
TPM1-203ENST00000317516 ALDOCP09972 364 aaKnown RBP15.81■□□□□ 0.12
TPM1-203ENST00000317516 EPHA3P29320 983 aa15.81■□□□□ 0.12
TPM1-203ENST00000317516 NUP214P35658 2090 aaPredicted RBP15.81■□□□□ 0.12
TPM1-203ENST00000317516 PGM1P36871 562 aa15.81■□□□□ 0.12
TPM1-203ENST00000317516 CSNK2A1P68400 391 aaPredicted RBP15.81■□□□□ 0.12
TPM1-203ENST00000317516 KCNJ10P78508 379 aa15.81■□□□□ 0.12
TPM1-203ENST00000317516 MAP1AP78559 2803 aaPredicted RBP15.81■□□□□ 0.12
TPM1-203ENST00000317516 GNA13Q14344 377 aa15.81■□□□□ 0.12
TPM1-203ENST00000317516 P2RY6Q15077 328 aa15.81■□□□□ 0.12
TPM1-203ENST00000317516 MAPK14Q16539 360 aa15.81■□□□□ 0.12
TPM1-203ENST00000317516 TFAP2EQ6VUC0 442 aa15.81■□□□□ 0.12
TPM1-203ENST00000317516 NUFIP2Q7Z417 695 aaKnown RBP15.81■□□□□ 0.12
TPM1-203ENST00000317516 CXorf67Q86X51 503 aaPredicted RBP15.81■□□□□ 0.12
TPM1-203ENST00000317516 WFDC11Q8NEX6 87 aa15.81■□□□□ 0.12
TPM1-203ENST00000317516 TEX37Q96LM6 180 aa15.81■□□□□ 0.12
TPM1-203ENST00000317516 TRNT1Q96Q11 434 aaKnown RBP15.81■□□□□ 0.12
TPM1-203ENST00000317516 CCL19Q99731 98 aa15.81■□□□□ 0.12
TPM1-203ENST00000317516 WDR55Q9H6Y2 383 aaPredicted RBP15.81■□□□□ 0.12
TPM1-203ENST00000317516 MANSC1Q9H8J5 431 aa15.81■□□□□ 0.12
TPM1-203ENST00000317516 BCO1Q9HAY6 547 aa15.81■□□□□ 0.12
TPM1-203ENST00000317516 NGBQ9NPG2 151 aa15.81■□□□□ 0.12
TPM1-203ENST00000317516 GPR45Q9Y5Y3 372 aa15.81■□□□□ 0.12
TPM1-203ENST00000317516 GOLGA8QA0A0J9YX86 632 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 CENPVL1A0A0U1RR11 272 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.8■□□□□ 0.12
TPM1-203ENST00000317516 GOLGA8OA6NCC3 632 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 GOLGA8NF8WBI6 632 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 HMGN4O00479 90 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 SNNO75324 88 aaPredicted RBP15.8■□□□□ 0.12
TPM1-203ENST00000317516 IL6P05231 212 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 KITP10721 976 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 IDO1P14902 403 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 IL32P24001 234 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 MAGOHP61326 146 aaKnown RBP15.8■□□□□ 0.12
TPM1-203ENST00000317516 RASGEF1BQ0VAM2 473 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 SFRP5Q5T4F7 317 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 NXNQ6DKJ4 435 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 FRRS1Q6ZNA5 592 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 TMPPEQ6ZT21 453 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 PLEKHM3Q6ZWE6 761 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 OLIG3Q7RTU3 272 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 RNF130Q86XS8 419 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 WFDC8Q8IUA0 241 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 CMIPQ8IY22 773 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 GABRG1Q8N1C3 465 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 ARFGAP2Q8N6H7 521 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 HSD17B8Q92506 261 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 PMM1Q92871 262 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 ZNF524Q96C55 264 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 ZHX1-C8orf76Q96EF9 292 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 HS3ST6Q96QI5 342 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 QRSL1Q9H0R6 528 aaKnown RBP15.8■□□□□ 0.12
TPM1-203ENST00000317516 MTHFD2LQ9H903 347 aaPredicted RBP15.8■□□□□ 0.12
TPM1-203ENST00000317516 EXOSC3Q9NQT5 275 aaKnown RBP15.8■□□□□ 0.12
TPM1-203ENST00000317516 DLL4Q9NR61 685 aa15.8■□□□□ 0.12
TPM1-203ENST00000317516 HRNRQ86YZ3 2850 aaPredicted RBP15.8■□□□□ 0.12
TPM1-203ENST00000317516 IGHV3-15A0A0B4J1V0 119 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms