RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 PDSS1Q5T2R2 415 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 SWT1Q5T5J6 900 aaKnown RBP16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 C3orf33Q6P1S2 294 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 CBLL1Q75N03 491 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 MEIOBQ8N635 442 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 RNF148Q8N7C7 305 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 MCUR1Q96AQ8 359 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 SLC7A6OSQ96CW6 309 aaPredicted RBP16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 NSMCE2Q96MF7 247 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 TIMP4Q99727 224 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 UGT2B28Q9BY64 529 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 TMEM27Q9HBJ8 222 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 SELENONQ9NZV5 590 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 ACTR3BQ9P1U1 418 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 SPRR3Q9UBC9 169 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 RPS6KB2Q9UBS0 482 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 USP22Q9UPT9 525 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 SLC6A5Q9Y345 797 aa16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 RP1L1Q8IWN7 2480 aaPredicted RBP16.19■□□□□ 0.18
SSSCA1-201ENST00000309328 NPIPA2E9PIF3 369 aa16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 NPIPA3F8WFD2 350 aa16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 AP3D1O14617 1153 aa16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 TPST1O60507 370 aa16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 BCAS1O75363 584 aaPredicted RBP16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 OPN1SWP03999 348 aa16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 STSP08842 583 aa16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 ZNF708P17019 499 aa16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 HOXB6P17509 224 aaKnown RBP16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 TCN1P20061 433 aaPredicted RBP16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 PSMA4P25789 261 aaKnown RBP16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 IFNA8P32881 189 aa16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 POLR2HP52434 150 aaKnown RBP16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 CRYBA2P53672 197 aa16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 RPS3AP61247 264 aaKnown RBP16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 TRIM25Q14258 630 aaKnown RBP16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 MTFR2Q6P444 385 aa16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 CHERPQ8IWX8 916 aaKnown RBP16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 GEMIN6Q8WXD5 167 aaKnown RBP16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 ASB9Q96DX5 294 aa16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 THTPAQ9BU02 230 aa16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 TRIM15Q9C019 465 aa16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 PCDHAC1Q9H158 963 aa16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 LRMDAQ9H2I8 198 aa16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 DCAF13Q9NV06 445 aaKnown RBP16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 EGFL7Q9UHF1 273 aa16.18■□□□□ 0.18
SSSCA1-201ENST00000309328 A0A1B0GUH1 482 aa16.17■□□□□ 0.18
SSSCA1-201ENST00000309328 SERPINA1P01009 418 aa16.17■□□□□ 0.18
SSSCA1-201ENST00000309328 TPOP07202 933 aa16.17■□□□□ 0.18
SSSCA1-201ENST00000309328 GKN3PP0CG01 181 aa16.17■□□□□ 0.18
SSSCA1-201ENST00000309328 PNMTP11086 282 aa16.17■□□□□ 0.18
SSSCA1-201ENST00000309328 LHX2P50458 406 aa16.17■□□□□ 0.18
SSSCA1-201ENST00000309328 HSF1Q00613 529 aa16.17■□□□□ 0.18
SSSCA1-201ENST00000309328 MERTKQ12866 999 aa16.17■□□□□ 0.18
SSSCA1-201ENST00000309328 TRAP1Q12931 704 aaKnown RBP16.17■□□□□ 0.18
SSSCA1-201ENST00000309328 TOMM34Q15785 309 aaPredicted RBP16.17■□□□□ 0.18
SSSCA1-201ENST00000309328 ZNF613Q6PF04 617 aa16.17■□□□□ 0.18
SSSCA1-201ENST00000309328 C5orf46Q6UWT4 87 aa16.17■□□□□ 0.18
SSSCA1-201ENST00000309328 ESPNLQ6ZVH7 1005 aa16.17■□□□□ 0.18
SSSCA1-201ENST00000309328 PLEKHM3Q6ZWE6 761 aa16.17■□□□□ 0.18
SSSCA1-201ENST00000309328 GPR32P1Q8NGA4 272 aa16.17■□□□□ 0.18
SSSCA1-201ENST00000309328 ZPLD1Q8TCW7 415 aa16.17■□□□□ 0.18
SSSCA1-201ENST00000309328 ADAM19Q9H013 955 aa16.17■□□□□ 0.18
SSSCA1-201ENST00000309328 TIGARQ9NQ88 270 aa16.17■□□□□ 0.18
SSSCA1-201ENST00000309328 CHRNA9Q9UGM1 479 aa16.17■□□□□ 0.18
SSSCA1-201ENST00000309328 ZNF337Q9Y3M9 751 aa16.17■□□□□ 0.18
SSSCA1-201ENST00000309328 ARPC2O15144 300 aa16.16■□□□□ 0.18
SSSCA1-201ENST00000309328 ZNF208O43345 1280 aa16.16■□□□□ 0.18
SSSCA1-201ENST00000309328 ZNF682O95780 498 aa16.16■□□□□ 0.18
SSSCA1-201ENST00000309328 CA7P43166 264 aa16.16■□□□□ 0.18
SSSCA1-201ENST00000309328 ZNF136P52737 540 aa16.16■□□□□ 0.18
SSSCA1-201ENST00000309328 IGFBP7Q16270 282 aa16.16■□□□□ 0.18
SSSCA1-201ENST00000309328 GXYLT1Q4G148 440 aa16.16■□□□□ 0.18
SSSCA1-201ENST00000309328 GLIPR1L2Q4G1C9 344 aa16.16■□□□□ 0.18
SSSCA1-201ENST00000309328 IFI44LQ53G44 452 aa16.16■□□□□ 0.18
SSSCA1-201ENST00000309328 ULK3Q6PHR2 472 aa16.16■□□□□ 0.18
SSSCA1-201ENST00000309328 CHMP1BQ7LBR1 199 aa16.16■□□□□ 0.18
SSSCA1-201ENST00000309328 FGD2Q7Z6J4 655 aa16.16■□□□□ 0.18
SSSCA1-201ENST00000309328 CD163Q86VB7 1156 aa16.16■□□□□ 0.18
SSSCA1-201ENST00000309328 DHFR2Q86XF0 187 aa16.16■□□□□ 0.18
SSSCA1-201ENST00000309328 CADM2Q8N3J6 435 aa16.16■□□□□ 0.18
SSSCA1-201ENST00000309328 POC1BQ8TC44 478 aa16.16■□□□□ 0.18
SSSCA1-201ENST00000309328 WDYHV1Q96HA8 205 aa16.16■□□□□ 0.18
SSSCA1-201ENST00000309328 TPD52L3Q96J77 140 aa16.16■□□□□ 0.18
SSSCA1-201ENST00000309328 SH3GLB1Q9Y371 365 aa16.16■□□□□ 0.18
SSSCA1-201ENST00000309328 EML6Q6ZMW3 1958 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 H0Y3Z8 333 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 H3BML4 177 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 J3QKU1 62 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 ADAMDEC1O15204 470 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 ADAM11O75078 769 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 EPPINO95925 133 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 IFNW1P05000 195 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 THRBP10828 461 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 PRG2P13727 222 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 PLA2G2AP14555 144 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 CXCR1P25024 350 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 SLC7A1P30825 629 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 CLDN18P56856 261 aa16.15■□□□□ 0.18
SSSCA1-201ENST00000309328 TMEM211Q6ICI0 200 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms