RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 DMBX1Q8NFW5 382 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 C2orf15Q8WU43 125 aaKnown RBP11.86□□□□□ -0.51
USP38-201ENST00000307017 FAM173AQ9BQD7 235 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 PDE7BQ9NP56 450 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 C1orf226A1L170 272 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 HRO43593 1189 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 ZNF44P15621 663 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 PRMT2P55345 433 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 PCBP3P57721 371 aaKnown RBP11.86□□□□□ -0.51
USP38-201ENST00000307017 RRAS2P62070 204 aaPredicted RBP11.86□□□□□ -0.51
USP38-201ENST00000307017 NHSL2Q5HYW2 709 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 TMEM234Q8WY98 164 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 BADQ92934 168 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 MYOM1P52179 1685 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 FER1L4A9Z1Z3 1794 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 FAM189A1O60320 539 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 RORAP35398 523 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 UBE2KP61086 200 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 SLC10A1Q14973 349 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 PHLDA2Q53GA4 152 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 RTP2Q5QGT7 225 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 TPGS2Q68CL5 300 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 BAIAP2L2Q6UXY1 529 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 NRARPQ7Z6K4 114 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 ARFGAP1Q8N6T3 406 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 ADOQ96SZ5 270 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 CPEB1Q9BZB8 566 aaKnown RBP11.86□□□□□ -0.51
USP38-201ENST00000307017 TP53TG5Q9Y2B4 290 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 TSTD3H0UI37 97 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 GABRPO00591 440 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 P04436 131 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 ANXA7P20073 488 aaKnown RBP11.86□□□□□ -0.51
USP38-201ENST00000307017 SERPINF1P36955 418 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 BAXQ07812 192 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 C4orf17Q53FE4 359 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 RFLNAQ6ZTI6 216 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 AMIGO3Q86WK7 504 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 GCDHQ92947 438 aaPredicted RBP11.86□□□□□ -0.51
USP38-201ENST00000307017 TVP23CQ96ET8 276 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 FUBP3Q96I24 572 aaKnown RBP eCLIP11.86□□□□□ -0.51
USP38-201ENST00000307017 SORT1Q99523 831 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 MAP3K3Q99759 626 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 RLIMQ9NVW2 624 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 MRPS17Q9Y2R5 130 aaKnown RBP11.86□□□□□ -0.51
USP38-201ENST00000307017 RGPD8O14715 1765 aaPredicted RBP11.86□□□□□ -0.51
USP38-201ENST00000307017 SLC16A7O60669 478 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 CLEC2LP0C7M8 214 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 PGCP20142 388 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 DCKP27707 260 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 AKR1C3P42330 323 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 RPL11P62913 178 aaKnown RBP11.86□□□□□ -0.51
USP38-201ENST00000307017 ACTC1P68032 377 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 ACTA1P68133 377 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 DCAF4L2Q8NA75 395 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 C7orf43Q8WVR3 580 aa11.86□□□□□ -0.51
USP38-201ENST00000307017 PABPC4LP0CB38 370 aaKnown RBP11.85□□□□□ -0.51
USP38-201ENST00000307017 PDZD3Q86UT5 571 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 INTS12Q96CB8 462 aaKnown RBP11.85□□□□□ -0.51
USP38-201ENST00000307017 KLHL42Q9P2K6 505 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 NUBP2Q9Y5Y2 271 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 ZFP92A6NM28 416 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 EFCAB7A8K855 629 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 NSA2O95478 260 aaKnown RBP11.85□□□□□ -0.51
USP38-201ENST00000307017 SNAI1O95863 264 aaPredicted RBP11.85□□□□□ -0.51
USP38-201ENST00000307017 SERPINE2P07093 398 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 G0S2P27469 103 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 DCTP40126 519 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 OR1D4P47884 311 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 TAS2R20P59543 309 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 SIMC1Q8NDZ2 872 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 OR7G1Q8NGA0 311 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 GGHQ92820 318 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 NTPCRQ9BSD7 190 aaKnown RBP11.85□□□□□ -0.51
USP38-201ENST00000307017 C1QTNF6Q9BXI9 259 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 OBP2BQ9NPH6 170 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 C19orf12Q9NSK7 152 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 PGAP2Q9UHJ9 254 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 ATG4BQ9Y4P1 393 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 KIF1AQ12756 1690 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 A0A087WV62 115 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 ELLP55199 621 aaPredicted RBP11.85□□□□□ -0.51
USP38-201ENST00000307017 PXDC1Q5TGL8 231 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 ZNF813Q6ZN06 617 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 METTL4Q8N3J2 472 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 MINDY1Q8N5J2 469 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 SECTM1Q8WVN6 248 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 RSPRY1Q96DX4 576 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 ACTRT3Q9BYD9 372 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 ACPTQ9BZG2 426 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 GSTO2Q9H4Y5 243 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 GPR32O75388 356 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 NPPAP01160 153 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 OR8G3PP0DMU2 310 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 SLC2A1P11166 492 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 APLNRP35414 380 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 HOXA1P49639 335 aaPredicted RBP11.85□□□□□ -0.51
USP38-201ENST00000307017 ERVK-16P61578 105 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 SELENOWP63302 87 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 ELOCQ15369 112 aa11.85□□□□□ -0.51
USP38-201ENST00000307017 ACKR1Q16570 336 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms