RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 SLC38A3Q99624 504 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 HCAR1Q9BXC0 346 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 HOXD1Q9GZZ0 328 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 S1PR5Q9H228 398 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 RNF121Q9H920 327 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 FAM60AQ9NP50 221 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 CLCA3PQ9Y6N3 262 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 BHLHE40O14503 412 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 NKX2-2O95096 273 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 PEPDP12955 493 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 TMEM53Q6P2H8 277 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 Q8N9G6 341 aaPredicted RBP12.58□□□□□ -0.4
CDH8-201ENST00000299345 ACOT12Q8WYK0 555 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 NECTIN4Q96NY8 510 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 DCLRE1CQ96SD1 692 aaKnown RBP12.58□□□□□ -0.4
CDH8-201ENST00000299345 WACQ9BTA9 647 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 INPP5EQ9NRR6 644 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 ZNF223Q9UK11 482 aaPredicted RBP12.58□□□□□ -0.4
CDH8-201ENST00000299345 MAT1AQ00266 395 aaKnown RBP12.58□□□□□ -0.4
CDH8-201ENST00000299345 ATAD3CQ5T2N8 411 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 KIAA0895LQ68EN5 471 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 METAP1DQ6UB28 335 aaPredicted RBP12.58□□□□□ -0.4
CDH8-201ENST00000299345 SAMD12Q8N8I0 201 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 DTX3Q8N9I9 347 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 C19orf47Q8N9M1 422 aaKnown RBP12.58□□□□□ -0.4
CDH8-201ENST00000299345 OR4N2Q8NGD1 307 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 ANKRD9Q96BM1 317 aaPredicted RBP12.58□□□□□ -0.4
CDH8-201ENST00000299345 MMABQ96EY8 250 aaPredicted RBP12.58□□□□□ -0.4
CDH8-201ENST00000299345 G6PC3Q9BUM1 346 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 CLEC4AQ9UMR7 237 aa12.58□□□□□ -0.4
CDH8-201ENST00000299345 MRPS7Q9Y2R9 242 aaKnown RBP12.58□□□□□ -0.4
CDH8-201ENST00000299345 BRWD1Q9NSI6 2320 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 CBX7O95931 251 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 SBK2P0C263 348 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 GSTT2P0CG29 244 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 GSTT2BP0CG30 244 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 SHC1P29353 583 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 UBE2IP63279 158 aaKnown RBP12.57□□□□□ -0.4
CDH8-201ENST00000299345 ACTC1P68032 377 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 ACTA1P68133 377 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 GALEQ14376 348 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 ZMYND19Q96E35 227 aaPredicted RBP12.57□□□□□ -0.4
CDH8-201ENST00000299345 ATF6BQ99941 703 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 NUFIP1Q9UHK0 495 aaKnown RBP12.57□□□□□ -0.4
CDH8-201ENST00000299345 CLUP10909 449 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 CHRNB1P11230 501 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 NAA10P41227 235 aaPredicted RBP12.57□□□□□ -0.4
CDH8-201ENST00000299345 RPS5P46782 204 aaKnown RBP12.57□□□□□ -0.4
CDH8-201ENST00000299345 EVX1P49640 407 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 PSMD4P55036 377 aaKnown RBP12.57□□□□□ -0.4
CDH8-201ENST00000299345 BDH1Q02338 343 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 PON3Q15166 354 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 ULK3Q6PHR2 472 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 SDR9C7Q8NEX9 313 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 SMAP2Q8WU79 429 aaPredicted RBP12.57□□□□□ -0.4
CDH8-201ENST00000299345 SGTBQ96EQ0 304 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 SPACA7Q96KW9 195 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 BEX2Q9BXY8 128 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 MCOLN1Q9GZU1 580 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 TP63Q9H3D4 680 aaPredicted RBP12.57□□□□□ -0.4
CDH8-201ENST00000299345 NLKQ9UBE8 527 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 SPTY2D1-AS1A0A0U1RR47 76 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 A0A1W2PRG6 482 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 HMX3A6NHT5 357 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 NDUFB2O95178 105 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 RPS4Y1P22090 263 aaKnown RBP12.57□□□□□ -0.4
CDH8-201ENST00000299345 EMDP50402 254 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 MAZP56270 477 aaKnown RBP12.57□□□□□ -0.4
CDH8-201ENST00000299345 CD83Q01151 205 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 ACSM1Q08AH1 577 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 P2RY14Q15391 338 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 TRAM1Q15629 374 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 ABI3BPQ7Z7G0 1075 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 OR6K6Q8NGW6 343 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 RLN3Q8WXF3 142 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 PTP4A1Q93096 173 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 MRPL48Q96GC5 212 aaKnown RBP12.57□□□□□ -0.4
CDH8-201ENST00000299345 MEPEQ9NQ76 525 aaPredicted RBP12.57□□□□□ -0.4
CDH8-201ENST00000299345 ERVK-19Q9WJR5 959 aa12.57□□□□□ -0.4
CDH8-201ENST00000299345 PRAMEF2O60811 474 aa12.56□□□□□ -0.4
CDH8-201ENST00000299345 HOXD12P35452 270 aa12.56□□□□□ -0.4
CDH8-201ENST00000299345 MTNR1BP49286 362 aa12.56□□□□□ -0.4
CDH8-201ENST00000299345 GPR143P51810 404 aa12.56□□□□□ -0.4
CDH8-201ENST00000299345 CTBP2P56545 445 aa12.56□□□□□ -0.4
CDH8-201ENST00000299345 OR12D2P58182 307 aa12.56□□□□□ -0.4
CDH8-201ENST00000299345 ASB18Q6ZVZ8 466 aa12.56□□□□□ -0.4
CDH8-201ENST00000299345 SLC22A18ASQ8N1D0 253 aa12.56□□□□□ -0.4
CDH8-201ENST00000299345 DEFB119Q8N690 84 aa12.56□□□□□ -0.4
CDH8-201ENST00000299345 DACT3Q96B18 629 aaPredicted RBP12.56□□□□□ -0.4
CDH8-201ENST00000299345 CTRCQ99895 268 aa12.56□□□□□ -0.4
CDH8-201ENST00000299345 EVA1AQ9H8M9 152 aa12.56□□□□□ -0.4
CDH8-201ENST00000299345 IER3IP1Q9Y5U9 82 aa12.56□□□□□ -0.4
CDH8-201ENST00000299345 A0A0B4J2E0 115 aa12.56□□□□□ -0.4
CDH8-201ENST00000299345 A0A1B0GX12 115 aa12.56□□□□□ -0.4
CDH8-201ENST00000299345 A0A1W2PPK0 400 aa12.56□□□□□ -0.4
CDH8-201ENST00000299345 LYRM1O43325 122 aa12.56□□□□□ -0.4
CDH8-201ENST00000299345 HCRTR1O43613 425 aa12.56□□□□□ -0.4
CDH8-201ENST00000299345 ARL4DP49703 201 aa12.56□□□□□ -0.4
CDH8-201ENST00000299345 GBX2P52951 348 aaPredicted RBP12.56□□□□□ -0.4
CDH8-201ENST00000299345 POU4F2Q12837 409 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms