RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 WWTR1Q9GZV5 400 aa5.24□□□□□ -1.57
CPSF2-201ENST00000298875 OR52A5Q9H2C5 316 aa5.24□□□□□ -1.57
CPSF2-201ENST00000298875 C5AR2Q9P296 337 aa5.24□□□□□ -1.57
CPSF2-201ENST00000298875 INTS6Q9UL03 887 aaKnown RBP5.24□□□□□ -1.57
CPSF2-201ENST00000298875 CSNK1G3Q9Y6M4 447 aa5.24□□□□□ -1.57
CPSF2-201ENST00000298875 NINQ8N4C6 2090 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 IGLON5A6NGN9 336 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 ZNF487B1APH4 448 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 M0R3H8 397 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 LCATP04180 440 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 SERPINA2P20848 420 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 INCA1Q0VD86 236 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 GRM7Q14831 915 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 EXOSC6Q5RKV6 272 aaKnown RBP5.23□□□□□ -1.57
CPSF2-201ENST00000298875 COX15Q7KZN9 410 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 PAPD5Q8NDF8 572 aaKnown RBP5.23□□□□□ -1.57
CPSF2-201ENST00000298875 OR5L2Q8NGL0 311 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 MSI2Q96DH6 328 aaKnown RBP5.23□□□□□ -1.57
CPSF2-201ENST00000298875 FAM212BQ9NTI7 297 aaPredicted RBP5.23□□□□□ -1.57
CPSF2-201ENST00000298875 FAM96BQ9Y3D0 163 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 PCDHGA5Q9Y5G8 931 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 KPTNQ9Y664 436 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 A0A087WUU8 490 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 MED6O75586 246 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 LALBAP00709 142 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 HRH2P25021 359 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 LMAN2Q12907 356 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 GAB1Q13480 694 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 B3GNT7Q8NFL0 401 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 OR4K5Q8NGD3 323 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 DIO2Q92813 273 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 AIG1Q9NVV5 245 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 MRPL22Q9NWU5 206 aaKnown RBP5.23□□□□□ -1.57
CPSF2-201ENST00000298875 PROS1P07225 676 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 ITGAMP11215 1152 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 KDELR2P33947 212 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 HCCSP53701 268 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 GLO1Q04760 184 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 MGAT3Q09327 533 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 SDR9C7Q8NEX9 313 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 MITD1Q8WV92 249 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 CHRDQ9H2X0 955 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 ZNF160Q9HCG1 818 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 VDAC3Q9Y277 283 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 PSMB10P40306 273 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 ETV4P43268 484 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 PPT1P50897 306 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 DAP3P51398 398 aaKnown RBP5.23□□□□□ -1.57
CPSF2-201ENST00000298875 BTN1A1Q13410 526 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 CST9LP1Q5W188 147 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 IL20RBQ6UXL0 311 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 OR5H6Q8NGV6 325 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 SORCS2Q96PQ0 1159 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 RANBP9Q96S59 729 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 DZANK1Q9NVP4 752 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 DDX60Q8IY21 1712 aaKnown RBP5.23□□□□□ -1.57
CPSF2-201ENST00000298875 M0R143 59 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 HOXA1P49639 335 aaPredicted RBP5.23□□□□□ -1.57
CPSF2-201ENST00000298875 NUMA1Q14980 2115 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 MSMO1Q15800 293 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 SOHLH1Q5JUK2 328 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 TANGO2Q6ICL3 276 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 SCAMP4Q969E2 229 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 BSCL2Q96G97 398 aaPredicted RBP5.23□□□□□ -1.57
CPSF2-201ENST00000298875 CDH20Q9HBT6 801 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 USP36Q9P275 1121 aaKnown RBP5.23□□□□□ -1.57
CPSF2-201ENST00000298875 COL2A1P02458 1487 aaPredicted RBP5.23□□□□□ -1.57
CPSF2-201ENST00000298875 A0A1W2PPC1 479 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 ANKRD34BA5PLL1 514 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 HLA-AP01891 365 aaKnown RBP5.23□□□□□ -1.57
CPSF2-201ENST00000298875 GYPBP06028 91 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 SPP1P10451 314 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 LRRC18Q8N456 261 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 OR52N2Q8NGI0 321 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 FOXRED1Q96CU9 486 aaPredicted RBP5.23□□□□□ -1.57
CPSF2-201ENST00000298875 FOXN4Q96NZ1 517 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 SEC22CQ9BRL7 303 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 PKIBQ9C010 78 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 HRH4Q9H3N8 390 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 LMAN1LQ9HAT1 526 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 SCN4AP35499 1836 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 LOC102723532A0A0G2JNH3 316 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 SLC43A1O75387 559 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 ELK1P19419 428 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 HEPHL1Q6MZM0 1159 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 WDR88Q6ZMY6 472 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 SERPINA12Q8IW75 414 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 OR9K2Q8NGE7 335 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 OR56B4Q8NH76 319 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 GTF2H4Q92759 462 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 FAM71F1Q96KD3 344 aaPredicted RBP5.23□□□□□ -1.57
CPSF2-201ENST00000298875 CCNL2Q96S94 520 aaPredicted RBP5.23□□□□□ -1.57
CPSF2-201ENST00000298875 SERINC2Q96SA4 455 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 IGSF5Q9NSI5 407 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 PCDHGA7Q9Y5G6 932 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 TSPAN11A1L157 253 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 CIDEAO60543 219 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 SYPP08247 313 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 CDK5R2Q13319 367 aa5.23□□□□□ -1.57
CPSF2-201ENST00000298875 HABP2Q14520 560 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms