RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 PRR19A6NJB7 356 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 MEN1O00255 615 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 STX11O75558 287 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 SERPINI2O75830 405 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 LYPD3O95274 346 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 MT-ND5P03915 603 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 SBK2P0C263 348 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 GDI1P31150 447 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 LYPD4Q6UWN0 246 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 RTL10Q7L3V2 364 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 LRRC28Q86X40 367 aaPredicted RBP22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 LNX2Q8N448 690 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 SDR9C7Q8NEX9 313 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 OR4N2Q8NGD1 307 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 OR4K13Q8NH42 304 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 GRPEL2Q8TAA5 225 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 PCNPQ8WW12 178 aaKnown RBP22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 ZNF350Q9GZX5 532 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 FAM86C2PA6NEL3 165 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 GPR89AB7ZAQ6 455 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 B3GALT2O43825 422 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 FZD7O75084 574 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 GPR89BP0CG08 455 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 ATP12AP54707 1039 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 DGCR2P98153 550 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 DGAT2L6Q6ZPD8 337 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 OAFQ86UD1 273 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 YAF2Q8IY57 180 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 OR2M4Q96R27 311 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 ZNF559Q9BR84 538 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 ALPK2Q86TB3 2170 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 CA3P07451 260 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 NGFRP08138 427 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 BMP8BP34820 402 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 NNATQ16517 81 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 PLA1AQ53H76 456 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 FAAH2Q6GMR7 532 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 BMP8AQ7Z5Y6 402 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 SLC44A3Q8N4M1 653 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 SARGQ9BW04 601 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 GON7Q9BXV9 100 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 PIGUQ9H490 435 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 KRCC1Q9NPI7 259 aaPredicted RBP22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 CACNG2Q9Y698 323 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 OR2W5A6NFC9 320 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 PRKNO60260 465 aaPredicted RBP22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 RASGRP1O95267 797 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 APODP05090 189 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 CTSBP07858 339 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 NID1P14543 1247 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 CXCL3P19876 107 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 ACSL1P33121 698 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 RPS15AP62244 130 aaKnown RBP22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 SUZ12Q15022 739 aaKnown RBP22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 OR4C6Q8NH72 309 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 CMC2Q9NRP2 79 aa22.55■■□□□ 1.2
SPTSSA-201ENST00000298130 OR6C74A6NCV1 312 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 ADH1BP00325 375 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 AHCYP23526 432 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 GIFP27352 417 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 ADPRHP54922 357 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 PGLYRP3Q96LB9 341 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 ERVMER34-1Q9H9K5 563 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 OR6C2Q9NZP2 312 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 FLRT3Q9NZU0 649 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 MED31Q9Y3C7 131 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 AK6Q9Y3D8 172 aaKnown RBP22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 TRIOO75962 3097 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 CHP2O43745 196 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 CAMK2BQ13554 666 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 RIN1Q13671 783 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 NDUFAF6Q330K2 333 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 ANKRD54Q6NXT1 300 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 LRRC17Q8N6Y2 441 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 OR11H7Q8NGC8 314 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 OR52E2Q8NGJ4 325 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 MED28Q9H204 178 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 CDCP1Q9H5V8 836 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 KIR3DX1Q9H7L2 352 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 DENND4AQ7Z401 1863 aa22.54■■□□□ 1.2
SPTSSA-201ENST00000298130 C2orf16Q68DN1 1984 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 HCRTR1O43613 425 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 F8A1P23610 371 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 TLX1P31314 330 aaPredicted RBP22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 PSMB10P40306 273 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 EMDP50402 254 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 TNK1Q13470 666 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 AMZ1Q400G9 498 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 FCRL6Q6DN72 434 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 CDK20Q8IZL9 346 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 ZNRF4Q8WWF5 429 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 CREB3L1Q96BA8 519 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 GSDMCQ9BYG8 508 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 KLF15Q9UIH9 416 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 PRUNE2Q8WUY3 3088 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 CACNA1IQ9P0X4 2223 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 RIIAD1A6NNX1 92 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 UGT2B7P16662 529 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 ATF1P18846 271 aa22.53■■□□□ 1.2
SPTSSA-201ENST00000298130 CFL1P23528 166 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms