RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 DAZLQ92904 295 aaKnown RBP15.5■□□□□ 0.07
CPSF4-201ENST00000292476 TMCO6Q96DC7 493 aa15.5■□□□□ 0.07
CPSF4-201ENST00000292476 SDF2Q99470 211 aa15.5■□□□□ 0.07
CPSF4-201ENST00000292476 CNPPD1Q9BV87 410 aa15.5■□□□□ 0.07
CPSF4-201ENST00000292476 POLE4Q9NR33 117 aa15.5■□□□□ 0.07
CPSF4-201ENST00000292476 QPCTLQ9NXS2 382 aa15.5■□□□□ 0.07
CPSF4-201ENST00000292476 CLDN16Q9Y5I7 305 aa15.5■□□□□ 0.07
CPSF4-201ENST00000292476 KCNE3Q9Y6H6 103 aa15.5■□□□□ 0.07
CPSF4-201ENST00000292476 CLCA3PQ9Y6N3 262 aa15.5■□□□□ 0.07
CPSF4-201ENST00000292476 NCOR2Q9Y618 2525 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 A0A087WUU8 490 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 EFCAB7A8K855 629 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 C17orf105B2RV13 164 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 THBS1P07996 1170 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 CCKBRP32239 447 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 STAT5AP42229 794 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 GAS1P54826 345 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 RUNX1T1Q06455 604 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 SNAPC1Q16533 368 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 NKAIN1Q4KMZ8 207 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 EIPR1Q53HC9 387 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 DCST2Q5T1A1 773 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 PRAMEF17Q5VTA0 474 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 PWWP2BQ6NUJ5 590 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 ACSM5Q6NUN0 579 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 GLRX5Q86SX6 157 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 KIF18BQ86Y91 864 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 TMEM151BQ8IW70 566 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 PIGXQ8TBF5 258 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.49■□□□□ 0.07
CPSF4-201ENST00000292476 EFHD2Q96C19 240 aaPredicted RBP15.49■□□□□ 0.07
CPSF4-201ENST00000292476 OTUB1Q96FW1 271 aaPredicted RBP15.49■□□□□ 0.07
CPSF4-201ENST00000292476 ZNF350Q9GZX5 532 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 SAP130Q9H0E3 1048 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 OR10A5Q9H207 317 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 FOLH1BQ9HBA9 442 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 Q9N2J8 555 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 EXOSC4Q9NPD3 245 aaKnown RBP15.49■□□□□ 0.07
CPSF4-201ENST00000292476 TOR4AQ9NXH8 423 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 NPAP1Q9NZP6 1156 aa15.49■□□□□ 0.07
CPSF4-201ENST00000292476 ADAMTS20P59510 1910 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 TCRBV16S1A1N1A0A5B0 115 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 TGFBR3LH3BV60 316 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 CPNE3O75131 537 aaKnown RBP15.48■□□□□ 0.07
CPSF4-201ENST00000292476 ATP6V1G1O75348 118 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 OR5F1O95221 314 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 DLGAP3O95886 979 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 DBIP07108 87 aaKnown RBP15.48■□□□□ 0.07
CPSF4-201ENST00000292476 GAAP10253 952 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 FPR3P25089 353 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 TNFSF8P32971 234 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 GABRA3P34903 492 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 RPS19P39019 145 aaKnown RBP15.48■□□□□ 0.07
CPSF4-201ENST00000292476 EMDP50402 254 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 PGDP52209 483 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 MC2RQ01718 297 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 CHRNEQ04844 493 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 FOXD4Q12950 439 aaPredicted RBP15.48■□□□□ 0.07
CPSF4-201ENST00000292476 DUSP8Q13202 625 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 TPBGQ13641 420 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 NSDHLQ15738 373 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 ZSWIM7Q19AV6 140 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 WDR53Q7Z5U6 358 aaPredicted RBP15.48■□□□□ 0.07
CPSF4-201ENST00000292476 ZNF619Q8N2I2 560 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 OR14A16Q8NHC5 309 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 ACOT11Q8WXI4 607 aaPredicted RBP15.48■□□□□ 0.07
CPSF4-201ENST00000292476 OSTF1Q92882 214 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 RFKQ969G6 155 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 CMKLR1Q99788 373 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 GPA33Q99795 319 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 G6PC3Q9BUM1 346 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 STRADBQ9C0K7 418 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 PNO1Q9NRX1 252 aaKnown RBP15.48■□□□□ 0.07
CPSF4-201ENST00000292476 MKL2Q9ULH7 1088 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 GTF2E2P29084 291 aaKnown RBP15.48■□□□□ 0.07
CPSF4-201ENST00000292476 TMED10P49755 219 aaKnown RBP15.48■□□□□ 0.07
CPSF4-201ENST00000292476 PDX1P52945 283 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 COL9A2Q14055 689 aaPredicted RBP15.48■□□□□ 0.07
CPSF4-201ENST00000292476 ZNF730Q6ZMV8 503 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 FRRS1Q6ZNA5 592 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 DGAT2L6Q6ZPD8 337 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 SHISA5Q8N114 240 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 CLIP4Q8N3C7 705 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 OR52P1PQ8NH57 321 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 HPS1Q92902 700 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 SLC25A46Q96AG3 418 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 SLC46A1Q96NT5 459 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 SDHCQ99643 169 aaPredicted RBP15.48■□□□□ 0.07
CPSF4-201ENST00000292476 COQ7Q99807 217 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 KRCC1Q9NPI7 259 aaPredicted RBP15.48■□□□□ 0.07
CPSF4-201ENST00000292476 ERVK-19Q9WJR5 959 aa15.48■□□□□ 0.07
CPSF4-201ENST00000292476 B4E171 279 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 AP3D1O14617 1153 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 SNPHO15079 494 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 KCNK2O95069 426 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 KLK3P07288 261 aaPredicted RBP15.47■□□□□ 0.07
CPSF4-201ENST00000292476 CCNYL3P0C7X3 344 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 SPINK2P20155 84 aa15.47■□□□□ 0.07
CPSF4-201ENST00000292476 TRHRP34981 398 aaPredicted RBP15.47■□□□□ 0.07
CPSF4-201ENST00000292476 ETV5P41161 510 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms