RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 SFXN2Q96NB2 322 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 PIGQQ9BRB3 760 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 CPPED1Q9BRF8 314 aaPredicted RBP8.23□□□□□ -1.09
HMGN1-201ENST00000288344 TMEM120AQ9BXJ8 343 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 ADAM19Q9H013 955 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 RMND5AQ9H871 391 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 RNF122Q9H9V4 155 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 SRA1Q9HD15 236 aaKnown RBP8.23□□□□□ -1.09
HMGN1-201ENST00000288344 A4GALTQ9NPC4 353 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 KLHL14Q9P2G3 628 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 ING1Q9UK53 422 aaPredicted RBP8.23□□□□□ -1.09
HMGN1-201ENST00000288344 PRDM4Q9UKN5 801 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 CAMK2AQ9UQM7 478 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 VDAC3Q9Y277 283 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 WDR45Q9Y484 360 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 VPS13CQ709C8 3753 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 A0A0G2JND7 137 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 FAM221AA4D161 298 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 CDHR4A6H8M9 788 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 FAM181BA6NEQ2 426 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 HSPB2A8KAH6 182 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 AQP8O94778 261 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 PGM3O95394 542 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 ADSLP30566 484 aaPredicted RBP8.22□□□□□ -1.09
HMGN1-201ENST00000288344 EIF1P41567 113 aaKnown RBP8.22□□□□□ -1.09
HMGN1-201ENST00000288344 KIR2DL2P43627 348 aaPredicted RBP8.22□□□□□ -1.09
HMGN1-201ENST00000288344 SLC6A8P48029 635 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 CRYBA2P53672 197 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 PCBP3P57721 371 aaKnown RBP8.22□□□□□ -1.09
HMGN1-201ENST00000288344 SESN3P58005 492 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 KLF10Q13118 480 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 SELPLGQ14242 412 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 TOMM20Q15388 145 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 HSPB2Q16082 182 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 NET1Q7Z628 596 aaPredicted RBP8.22□□□□□ -1.09
HMGN1-201ENST00000288344 LSRQ86X29 649 aaPredicted RBP8.22□□□□□ -1.09
HMGN1-201ENST00000288344 ADGRG3Q86Y34 549 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 PTOV1Q86YD1 416 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 CMIPQ8IY22 773 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 CLIP4Q8N3C7 705 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 ZNF527Q8NB42 609 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 FBXO27Q8NI29 283 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 FIG4Q92562 907 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 MAL2Q969L2 176 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 STARD4Q96DR4 205 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 SH3YL1Q96HL8 342 aaPredicted RBP8.22□□□□□ -1.09
HMGN1-201ENST00000288344 ZNF845Q96IR2 970 aaPredicted RBP8.22□□□□□ -1.09
HMGN1-201ENST00000288344 MRGPRX4Q96LA9 322 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 RNF145Q96MT1 663 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 ANKRD27Q96NW4 1050 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 THUMPD3Q9BV44 507 aaKnown RBP8.22□□□□□ -1.09
HMGN1-201ENST00000288344 CCDC106Q9BWC9 280 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 TRIM8Q9BZR9 551 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 RABEP2Q9H5N1 569 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 TMEM38AQ9H6F2 299 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 EXO5Q9H790 373 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 COQ10BQ9H8M1 238 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 CHST11Q9NPF2 352 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 ACER3Q9NUN7 267 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 DNAJB12Q9NXW2 375 aaKnown RBP8.22□□□□□ -1.09
HMGN1-201ENST00000288344 ALKBH4Q9NXW9 302 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 DKKL1Q9UK85 242 aa8.22□□□□□ -1.09
HMGN1-201ENST00000288344 ZNF469Q96JG9 3925 aaPredicted RBP8.21□□□□□ -1.09
HMGN1-201ENST00000288344 A0A0G2JPF8 293 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 NKX2-6A6NCS4 301 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 A8MXE2 369 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 HNRNPCL2B2RXH8 293 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 HNRNPCL3B7ZW38 293 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 FAM47E-STBD1D6RA91 191 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 PRSS44E7EML9 344 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 HNRNPCL1O60812 293 aaKnown RBP8.21□□□□□ -1.1
HMGN1-201ENST00000288344 FZD7O75084 574 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 CSTAP01040 98 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 SNRPB2P08579 225 aaKnown RBP8.21□□□□□ -1.1
HMGN1-201ENST00000288344 HNRNPCL4P0DMR1 293 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 ARAFP10398 606 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 UBL4AP11441 157 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 NCF2P19878 526 aaPredicted RBP8.21□□□□□ -1.1
HMGN1-201ENST00000288344 CTSSP25774 331 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 ELK4P28324 431 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 ARFIP2P53365 341 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 SEC24CP53992 1094 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 DSTNP60981 165 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 STX1BP61266 288 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 SRYQ05066 204 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 FOXF1Q12946 379 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 QPRTQ15274 297 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 SF3B4Q15427 424 aaKnown RBP eCLIP8.21□□□□□ -1.12e-7■■■■□ 20.5
HMGN1-201ENST00000288344 COQ5Q5HYK3 327 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 ATAD3BQ5T9A4 648 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 RAET1LQ5VY80 246 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 C8orf82Q6P1X6 216 aaPredicted RBP8.21□□□□□ -1.1
HMGN1-201ENST00000288344 ESPNLQ6ZVH7 1005 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 EIF3MQ7L2H7 374 aaKnown RBP8.21□□□□□ -1.1
HMGN1-201ENST00000288344 C16orf62Q7Z3J2 963 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 HMGN2P46Q86SG4 172 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 CALHM3Q86XJ0 350 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 DMRTC2Q8IXT2 367 aaPredicted RBP8.21□□□□□ -1.1
HMGN1-201ENST00000288344 CA5BP1Q8WTZ4 195 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 ST8SIA1Q92185 356 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms