RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 PLGP00747 810 aaPredicted RBP8.65□□□□□ -1.02
LRTM1-201ENST00000273286 ABHD2P08910 425 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 PAX1P15863 534 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 TSPAN8P19075 237 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 IL11P20809 199 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 LCN1P31025 176 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 CCKARP32238 428 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 NCBP2P52298 156 aaKnown RBP eCLIP8.65□□□□□ -1.02
LRTM1-201ENST00000273286 PRKAA2P54646 552 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 SIRPAP78324 504 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 RAE1P78406 368 aaKnown RBP8.65□□□□□ -1.02
LRTM1-201ENST00000273286 GUSBP1Q15486 140 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 IMPG1Q17R60 797 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 UNC50Q53HI1 259 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 SH2D4BQ5SQS7 431 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 PLEKHM3Q6ZWE6 761 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 EXOC3L1Q86VI1 746 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 MISPQ8IVT2 679 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 NOA1Q8NC60 698 aaKnown RBP8.65□□□□□ -1.02
LRTM1-201ENST00000273286 TMEM171Q8WVE6 324 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 FIG4Q92562 907 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 APIPQ96GX9 242 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 ZNF764Q96H86 408 aaPredicted RBP8.65□□□□□ -1.02
LRTM1-201ENST00000273286 MARK4Q96L34 752 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 Q96MF0 132 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 TMEM237Q96Q45 408 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 LMF2Q9BU23 707 aaKnown RBP8.65□□□□□ -1.02
LRTM1-201ENST00000273286 PRRG4Q9BZD6 226 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 OPN3Q9H1Y3 402 aaPredicted RBP8.65□□□□□ -1.02
LRTM1-201ENST00000273286 ZMAT4Q9H898 229 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 ANKRA2Q9H9E1 313 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 MYNNQ9NPC7 610 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 PLSCR4Q9NRQ2 329 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 MCTS1Q9ULC4 181 aaKnown RBP8.65□□□□□ -1.02
LRTM1-201ENST00000273286 CSPG4Q6UVK1 2322 aa8.65□□□□□ -1.02
LRTM1-201ENST00000273286 UPK1AO00322 258 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 FAM20BO75063 409 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 RSL1D1O76021 490 aaKnown RBP8.64□□□□□ -1.03
LRTM1-201ENST00000273286 HSPA4LO95757 839 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 ANGPTL1O95841 491 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 LY6G6DO95868 133 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 NGFRP08138 427 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 PABPC4LP0CB38 370 aaKnown RBP8.64□□□□□ -1.03
LRTM1-201ENST00000273286 DDX5P17844 614 aaKnown RBP8.64□□□□□ -1.03
LRTM1-201ENST00000273286 ME2P23368 584 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 SUCLG1P53597 346 aaKnown RBP8.64□□□□□ -1.03
LRTM1-201ENST00000273286 CTBP2P56545 445 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 CLDN15P56746 228 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 C2orf80Q0P641 193 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 ETFDHQ16134 617 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 TCHHL1Q5QJ38 904 aaPredicted RBP8.64□□□□□ -1.03
LRTM1-201ENST00000273286 PDSS1Q5T2R2 415 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 PLXDC2Q6UX71 529 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 Q71RC1 249 aaPredicted RBP8.64□□□□□ -1.03
LRTM1-201ENST00000273286 WDR75Q8IWA0 830 aaKnown RBP8.64□□□□□ -1.03
LRTM1-201ENST00000273286 IFT20Q8IY31 132 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 CMTM4Q8IZR5 234 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 ZNF610Q8N9Z0 462 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 OR4N2Q8NGD1 307 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 DUSP19Q8WTR2 217 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 PERPQ96FX8 193 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 RRAGDQ9NQL2 400 aaPredicted RBP8.64□□□□□ -1.03
LRTM1-201ENST00000273286 MED11Q9P086 117 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 TMEM216Q9P0N5 145 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 SNX8Q9Y5X2 465 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 ROS1P08922 2347 aa8.64□□□□□ -1.03
LRTM1-201ENST00000273286 ALG1L2C9J202 215 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 SS18L1O75177 396 aaPredicted RBP8.63□□□□□ -1.03
LRTM1-201ENST00000273286 SYNGR4O95473 234 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 CHN1P15882 459 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 TCEA1P23193 301 aaKnown RBP8.63□□□□□ -1.03
LRTM1-201ENST00000273286 PTH2RP49190 550 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 ZNF41P51814 821 aaPredicted RBP8.63□□□□□ -1.03
LRTM1-201ENST00000273286 CLDN20P56880 219 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 STX5Q13190 355 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 SLC29A2Q14542 456 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 TMEM44Q2T9K0 475 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 FAM71E1Q6IPT2 247 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 TMEM107Q6UX40 140 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 SH2D5Q6ZV89 423 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 ESPNLQ6ZVH7 1005 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 TRMT10CQ7L0Y3 403 aaKnown RBP8.63□□□□□ -1.03
LRTM1-201ENST00000273286 GTPBP8Q8N3Z3 284 aaPredicted RBP8.63□□□□□ -1.03
LRTM1-201ENST00000273286 ZNF611Q8N823 705 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 CDRT4Q8N9R6 151 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 CEP70Q8NHQ1 597 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 ZFP28Q8NHY6 868 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 PPP1R14CQ8TAE6 165 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 ACTRT2Q8TDY3 377 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 IFT81Q8WYA0 676 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 ELP4Q96EB1 424 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 AMDHD1Q96NU7 426 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 HDHD5Q9BXW7 423 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 EBPLQ9BY08 206 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 KLHL4Q9C0H6 718 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 MID1IP1Q9NPA3 183 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 NGBQ9NPG2 151 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 DCDC2Q9UHG0 476 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 GPR52Q9Y2T5 361 aa8.63□□□□□ -1.03
LRTM1-201ENST00000273286 RAI1Q7Z5J4 1906 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms