RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 VEZF1Q14119 521 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 P2RY6Q15077 328 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 RNPS1Q15287 305 aaKnown RBP7.91□□□□□ -1.14
TPM3-201ENST00000271850 ARL13AQ5H913 290 aaPredicted RBP7.91□□□□□ -1.14
TPM3-201ENST00000271850 CFAP157Q5JU67 520 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 C11orf71Q6IPW1 123 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 HEPHL1Q6MZM0 1159 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 B3GLCTQ6Y288 498 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 DNAJC14Q6Y2X3 702 aaPredicted RBP7.91□□□□□ -1.14
TPM3-201ENST00000271850 ZCCHC23Q6ZST2 131 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 MTERF4Q7Z6M4 381 aaKnown RBP7.91□□□□□ -1.14
TPM3-201ENST00000271850 DTX2Q86UW9 622 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 PHC2Q8IXK0 858 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 RIMKLAQ8IXN7 391 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 IFT20Q8IY31 132 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 MNS1Q8NEH6 495 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 ATP6V1C2Q8NEY4 427 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 STEAP2Q8NFT2 490 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 OR5AK3PQ8NH89 298 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 ZFP28Q8NHY6 868 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 SMAP2Q8WU79 429 aaPredicted RBP7.91□□□□□ -1.14
TPM3-201ENST00000271850 ANP32BQ92688 251 aaKnown RBP7.91□□□□□ -1.14
TPM3-201ENST00000271850 FBXW5Q969U6 566 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 MTERF3Q96E29 417 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 OR7D2Q96RA2 312 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 C1orf50Q9BV19 199 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 QRSL1Q9H0R6 528 aaKnown RBP7.91□□□□□ -1.14
TPM3-201ENST00000271850 SLC17A7Q9P2U7 560 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 LIPT1Q9Y234 373 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 TMED5Q9Y3A6 229 aa7.91□□□□□ -1.14
TPM3-201ENST00000271850 YLPM1P49750 1951 aaKnown RBP7.9□□□□□ -1.14
TPM3-201ENST00000271850 IGHV4-30-2A0A087WSY4 118 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 PRAMEF27A3QJZ7 478 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 COPEO14579 308 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 FCMRO60667 390 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 CYTIPO60759 359 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 TRIM13O60858 407 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 SCN2BO60939 215 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 PRKD3O94806 890 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 CD3EP07766 207 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 NEFHP12036 1026 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 CREB1P16220 341 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 ME2P23368 584 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 EIF1P41567 113 aaKnown RBP7.9□□□□□ -1.14
TPM3-201ENST00000271850 SERPINB4P48594 390 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 CCT3P49368 545 aaKnown RBP7.9□□□□□ -1.14
TPM3-201ENST00000271850 ATP12AP54707 1039 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 SUMO3P55854 103 aaPredicted RBP7.9□□□□□ -1.14
TPM3-201ENST00000271850 RAC3P60763 192 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 HBA1P69905 142 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 DMTNQ08495 405 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 FAPQ12884 760 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 SELENBP1Q13228 472 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 ITGADQ13349 1161 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 QPRTQ15274 297 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 MAPK14Q16539 360 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 TMEM201Q5SNT2 666 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 C6orf136Q5SQH8 315 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 PDZK1Q5T2W1 519 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 ABLIM2Q6H8Q1 611 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 Q6ZT83 130 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 BHLHA15Q7RTS1 189 aaPredicted RBP7.9□□□□□ -1.14
TPM3-201ENST00000271850 STK32CQ86UX6 486 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 HOMEZQ8IX15 550 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 ZNF527Q8NB42 609 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 OR2W6PQ8NHA6 318 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 AGR3Q8TD06 166 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 KISS1RQ969F8 398 aaPredicted RBP7.9□□□□□ -1.14
TPM3-201ENST00000271850 COQ8BQ96D53 544 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 SDF2Q99470 211 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 TACO1Q9BSH4 297 aaKnown RBP7.9□□□□□ -1.14
TPM3-201ENST00000271850 ACTRT3Q9BYD9 372 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 POTEKPQ9BYX7 375 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 GP6Q9HCN6 339 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 MKS1Q9NXB0 559 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 ZDHHC2Q9UIJ5 367 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 DTNAQ9Y4J8 743 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 TRAF6Q9Y4K3 522 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 SNX8Q9Y5X2 465 aa7.9□□□□□ -1.14
TPM3-201ENST00000271850 GPC6Q9Y625 555 aaPredicted RBP7.9□□□□□ -1.14
TPM3-201ENST00000271850 ZNF716A6NP11 495 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 E7EQL1 145 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 KIF2AO00139 706 aaPredicted RBP7.89□□□□□ -1.15
TPM3-201ENST00000271850 CD5LO43866 347 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 NPHS1O60500 1241 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 PEX11AO75192 247 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 UGT2B17O75795 530 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 SLU7O95391 586 aaKnown RBP7.89□□□□□ -1.15
TPM3-201ENST00000271850 PGM3O95394 542 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 HPGDP15428 266 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 IL32P24001 234 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 ASMTP46597 345 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 CCT5P48643 541 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 CASP9P55211 416 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 PHC1P78364 1004 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 IRX1P78414 480 aaPredicted RBP7.89□□□□□ -1.15
TPM3-201ENST00000271850 SLC25A3Q00325 362 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 TP53BP2Q13625 1128 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 TIGD2Q4W5G0 525 aa7.89□□□□□ -1.15
TPM3-201ENST00000271850 PDSS1Q5T2R2 415 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms