RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 AIMP2Q13155 320 aaKnown RBP10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 TCTE1Q5JU00 501 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 KCTD9Q7L273 389 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 GALNTL5Q7Z4T8 443 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 GLCCI1Q86VQ1 547 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 POGLUT1Q8NBL1 392 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 OR4M1Q8NGD0 313 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 SLC7A13Q8TCU3 470 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 THEM6Q8WUY1 208 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 LRRC3BQ96PB8 259 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 PLA2G2FQ9BZM2 168 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 CUEDC1Q9NWM3 386 aaPredicted RBP10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 MMP17Q9ULZ9 603 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 TMEM129A0AVI4 362 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 F5H5P2 479 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 RENP00797 406 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 EGFP01133 1207 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 AK4P27144 223 aaPredicted RBP10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 RNF144AP50876 292 aaPredicted RBP10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 GBX1Q14549 363 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 TP53I3Q53FA7 332 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 PIP5KL1Q5T9C9 394 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 PTCRAQ6ISU1 281 aaPredicted RBP10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 SLC25A24Q6NUK1 477 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 FAM83HQ6ZRV2 1179 aaPredicted RBP10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 JAGN1Q8N5M9 183 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 OR51L1Q8NGJ5 315 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 NSMAFQ92636 917 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 CXorf36Q9H7Y0 433 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 LMAN1LQ9HAT1 526 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 NOX3Q9HBY0 568 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 TAS2R8Q9NYW2 309 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 DOCK4Q8N1I0 1966 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 GOSR2O14653 212 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 RNF13O43567 381 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 SRFP11831 508 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 PSMB1P20618 241 aaKnown RBP10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 MTNR1BP49286 362 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 EVX1P49640 407 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 CLDN20P56880 219 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 NFATC4Q14934 902 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 MLF2Q15773 248 aaPredicted RBP10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 SFXN4Q6P4A7 337 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 SIAH3Q8IW03 269 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 FAM26EQ8N5C1 309 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 OR56A3Q8NH54 315 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 ZDHHC1Q8WTX9 485 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 ARHGAP9Q9BRR9 750 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 ABRACLQ9P1F3 81 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 COPS3Q9UNS2 423 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 CYP8B1Q9UNU6 501 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 SPTAN1Q13813 2472 aaKnown RBP10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 WISP3O95389 354 aaPredicted RBP10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 CYB5AP00167 134 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 CPEP16870 476 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 PFN3P60673 137 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 GALK2Q01415 458 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 FGL1Q08830 312 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 PUM1Q14671 1186 aaKnown RBP eCLIP10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 OR4C11Q6IEV9 310 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 SLC9B2Q86UD5 537 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 C4orf36Q96KX1 117 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 C7orf34Q96L11 122 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 CNN2Q99439 309 aaKnown RBP10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 GPER1Q99527 375 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 C1QTNF2Q9BXJ5 285 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 TPSD1Q9BZJ3 242 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 GXYLT2A0PJZ3 443 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 BLOC1S5-TXNDC5H3BN57 136 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 SCO2O43819 266 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 UBL3O95164 117 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 LALBAP00709 142 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 SNRPBP14678 240 aaKnown RBP10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 NFYAP23511 347 aaPredicted RBP10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 IMPA1P29218 277 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 PTGER1P34995 402 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 CCR6P51684 374 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 KIAA1024LP59773 190 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 ARHGAP11AQ6P4F7 1023 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 RDH10Q8IZV5 341 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 OR10H5Q8NGA6 315 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 OR52E2Q8NGJ4 325 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 OR5M3Q8NGP4 307 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 HS6ST2Q96MM7 605 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 CST11Q9H112 138 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 GPN3Q9UHW5 284 aaPredicted RBP10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 MKL2Q9ULH7 1088 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 TRAPPC13A5PLN9 417 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 ZNF705EA8MWA4 302 aaPredicted RBP10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 TEX46H3BTG2 121 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 GAPDHSO14556 408 aaPredicted RBP10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 GMFGO60234 142 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 PRH1P02810 166 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 ASGR2P07307 311 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 ELK1P19419 428 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 MMP11P24347 488 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 KCNJ5P48544 419 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 CSRP3P50461 194 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 CRYZQ08257 329 aaKnown RBP10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 PCGF3Q3KNV8 242 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms