RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 PAPD4Q6PIY7 484 aaKnown RBP14.37□□□□□ -0.11
TIMP3-201ENST00000266085 ZNF704Q6ZNC4 412 aaPredicted RBP14.37□□□□□ -0.11
TIMP3-201ENST00000266085 SPRED1Q7Z699 444 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 SPRYD4Q8WW59 207 aaPredicted RBP14.37□□□□□ -0.11
TIMP3-201ENST00000266085 FAM46BQ96A09 425 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 FAM210AQ96ND0 272 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 MNTQ99583 582 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 TVP23AA6NH52 213 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 SLC35E2P0CK97 266 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 LCN1P31025 176 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 PDE7AQ13946 482 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 RNASE10Q5GAN6 216 aaKnown RBP14.37□□□□□ -0.11
TIMP3-201ENST00000266085 SLC15A4Q8N697 577 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 C19orf43Q9BQ61 176 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 NT5DC2Q9H857 520 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 WASF3Q9UPY6 502 aa14.37□□□□□ -0.11
TIMP3-201ENST00000266085 FTCDNL1E5RQL4 147 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 ACPPP15309 386 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 SLC5A2P31639 672 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 RGS6P49758 472 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 MANEAQ5SRI9 462 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 DCAF12Q5T6F0 453 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 AGBL4Q5VU57 503 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 Q6ZPB1 254 aaPredicted RBP14.36□□□□□ -0.11
TIMP3-201ENST00000266085 SLC16A11Q8NCK7 471 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 ELP4Q96EB1 424 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 OR10A5Q9H207 317 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 TP63Q9H3D4 680 aaPredicted RBP14.36□□□□□ -0.11
TIMP3-201ENST00000266085 TMEM38AQ9H6F2 299 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 RABL2AQ9UBK7 228 aaPredicted RBP14.36□□□□□ -0.11
TIMP3-201ENST00000266085 ACAD8Q9UKU7 415 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 RABL2BQ9UNT1 228 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 COL11A2P13942 1736 aaPredicted RBP14.36□□□□□ -0.11
TIMP3-201ENST00000266085 SYT5O00445 386 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 CTNSO60931 367 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 PITPNBP48739 271 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 EIF2B1Q14232 305 aaKnown RBP14.36□□□□□ -0.11
TIMP3-201ENST00000266085 CDNFQ49AH0 187 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 B3GNT8Q7Z7M8 397 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 SYNPOQ8N3V7 929 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 GDPD1Q8N9F7 314 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 TAS2R8Q9NYW2 309 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 ANKRD31Q8N7Z5 1873 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 SLC16A7O60669 478 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 ARG2P78540 354 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 Q6ZS52 159 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 CTRCQ99895 268 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 OR52A5Q9H2C5 316 aa14.36□□□□□ -0.11
TIMP3-201ENST00000266085 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.36□□□□□ -0.11
TIMP3-201ENST00000266085 GASTP01350 101 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 GLULP15104 373 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 ZNF26P17031 533 aaPredicted RBP14.35□□□□□ -0.11
TIMP3-201ENST00000266085 CD40LGP29965 261 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 SSTR4P31391 388 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 CA5AP35218 305 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 SMAD2Q15796 467 aaKnown RBP14.35□□□□□ -0.11
TIMP3-201ENST00000266085 STX12Q86Y82 276 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 ZNF417Q8TAU3 575 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 ZFPM2Q8WW38 1151 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 SLC6A7Q99884 636 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 OR51B4Q9Y5P0 310 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 A0A1W2PPC4 97 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 ATP6V1G1O75348 118 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 THBS2P35442 1172 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 ACTBP60709 375 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 ACTG1P63261 375 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 ATXN7L3Q14CW9 347 aaPredicted RBP14.35□□□□□ -0.11
TIMP3-201ENST00000266085 HES5Q5TA89 166 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 OLIG3Q7RTU3 272 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 PIWIL3Q7Z3Z3 882 aaKnown RBP14.35□□□□□ -0.11
TIMP3-201ENST00000266085 MS4A6EQ96DS6 147 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 RLIMQ9NVW2 624 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 DOCK3Q8IZD9 2030 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 FBXO45P0C2W1 286 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 ZNF16P17020 682 aaPredicted RBP14.35□□□□□ -0.11
TIMP3-201ENST00000266085 CCR5P51681 352 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 CSNK2A1P68400 391 aaPredicted RBP14.35□□□□□ -0.11
TIMP3-201ENST00000266085 GRK1Q15835 563 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 ZNF322Q6U7Q0 402 aaPredicted RBP14.35□□□□□ -0.11
TIMP3-201ENST00000266085 SH2D5Q6ZV89 423 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 MEPCEQ7L2J0 689 aaKnown RBP14.35□□□□□ -0.11
TIMP3-201ENST00000266085 ANKRD13BQ86YJ7 626 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 TRMT10AQ8TBZ6 339 aaKnown RBP14.35□□□□□ -0.11
TIMP3-201ENST00000266085 DUSP19Q8WTR2 217 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 SPTSSAQ969W0 71 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 ZNF707Q96C28 371 aaPredicted RBP14.35□□□□□ -0.11
TIMP3-201ENST00000266085 EGLN3Q9H6Z9 239 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 FBXL3Q9UKT7 428 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 SLC6A5Q9Y345 797 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 KIAA1217Q5T5P2 1943 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 GGT3PA6NGU5 568 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 PLRG1O43660 514 aaKnown RBP14.35□□□□□ -0.11
TIMP3-201ENST00000266085 LCATP04180 440 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 CEACAM5P06731 702 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 TMEM225BP0DP42 221 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 AMY2BP19961 511 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 MAGEA2P43356 314 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 DAPP51397 102 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 FOXK1P85037 733 aa14.35□□□□□ -0.11
TIMP3-201ENST00000266085 NDNFQ8TB73 568 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms