RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 ATP12AP54707 1039 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 RUNX1T1Q06455 604 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 CRTC2Q53ET0 693 aaPredicted RBP10.27□□□□□ -0.77
MSH3-201ENST00000265081 ARHGAP11AQ6P4F7 1023 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 ULK3Q6PHR2 472 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 GPALPP1Q8IXQ4 340 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 CADM4Q8NFZ8 388 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 RIT1Q92963 219 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 KCTD12Q96CX2 325 aaKnown RBP10.27□□□□□ -0.77
MSH3-201ENST00000265081 TMEM27Q9HBJ8 222 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 EXOSC4Q9NPD3 245 aaKnown RBP10.27□□□□□ -0.77
MSH3-201ENST00000265081 STARD5Q9NSY2 213 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 KLHL21Q9UJP4 597 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 OGG1O15527 345 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 APOL3O95236 402 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 EIF2S1P05198 315 aaKnown RBP10.26□□□□□ -0.77
MSH3-201ENST00000265081 SBK2P0C263 348 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 FNTBP49356 437 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 TAS2R43P59537 309 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 ARL14Q8N4G2 192 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 CELF2-AS1Q8N7Q2 184 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 LRRC75AQ8NAA5 344 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 RCBTB1Q8NDN9 531 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 ATP6V1C2Q8NEY4 427 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 OR4N2Q8NGD1 307 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 HTRA1Q92743 480 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 RNF166Q96A37 237 aaPredicted RBP10.26□□□□□ -0.77
MSH3-201ENST00000265081 ERVMER34-1Q9H9K5 563 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 ZNF229Q9UJW7 825 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 TMEM184BQ9Y519 407 aaPredicted RBP10.26□□□□□ -0.77
MSH3-201ENST00000265081 PCDHGB7Q9Y5F8 929 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 PLA2G10O15496 165 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 SKP1P63208 163 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 RTL4Q6ZR62 310 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 BCORP1Q8N888 145 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 EXD3Q8N9H8 876 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 KLHDC7BQ96G42 594 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 C12orf10Q9HB07 376 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 C14orf119Q9NWQ9 140 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 GMEB2Q9UKD1 530 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 IGKV1D-42A0A075B6H8 117 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 ARPC3O15145 178 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 CD27P26842 260 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 ACTC1P68032 377 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 ACTA1P68133 377 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 TCEA2Q15560 299 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 ZNF684Q5T5D7 378 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 AKAP14Q86UN6 197 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 SYS1Q8N2H4 156 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 DUSP18Q8NEJ0 188 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 OR6F1Q8NGZ6 308 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 SACM1LQ9NTJ5 587 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 IRAK4Q9NWZ3 460 aa10.26□□□□□ -0.77
MSH3-201ENST00000265081 EYSQ5T1H1 3165 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 A0A1W2PQ09 198 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 FAM86C2PA6NEL3 165 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 SLC9B1P1A6NJY1 282 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 C12orf71A8MTZ7 269 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 SNPHO15079 494 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 SLC19A2O60779 497 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 SSTR4P31391 388 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 SMAD4Q13485 552 aaKnown RBP10.25□□□□□ -0.77
MSH3-201ENST00000265081 CRMP1Q14194 572 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 ZNF791Q3KP31 576 aaPredicted RBP10.25□□□□□ -0.77
MSH3-201ENST00000265081 KIRREL2Q6UWL6 708 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 NRARPQ7Z6K4 114 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 TPRA1Q86W33 373 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 ZNF440Q8IYI8 595 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 HPS1Q92902 700 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 TP53INP1Q96A56 240 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 CEP19Q96LK0 163 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 PLCL2Q9UPR0 1127 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 IDH3BO43837 385 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 IL10RAQ13651 578 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 ELOCQ15369 112 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 CDONQ4KMG0 1287 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 SLC35D3Q5M8T2 416 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 VASH1Q7L8A9 365 aaPredicted RBP10.25□□□□□ -0.77
MSH3-201ENST00000265081 SLITRK4Q8IW52 837 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 POMGNT2Q8NAT1 580 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 TMEM203Q969S6 136 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 C1GALT1C1Q96EU7 318 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 TMEM43Q9BTV4 400 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 ADAMTS9Q9P2N4 1935 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 TLCD2A6NGC4 264 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 FAM183AA6NL82 134 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 METTL12A8MUP2 240 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 PRR23D1E9PI22 279 aaPredicted RBP10.25□□□□□ -0.77
MSH3-201ENST00000265081 MBTPS2O43462 519 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 TXNDC12O95881 172 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 IGKV3-11P04433 115 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 PRR23D2P0DMB1 279 aaPredicted RBP10.25□□□□□ -0.77
MSH3-201ENST00000265081 HK1P19367 917 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 SLC6A6P31641 620 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 DDOSTP39656 456 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 GPR143P51810 404 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 ZNHIT3Q15649 155 aaPredicted RBP10.25□□□□□ -0.77
MSH3-201ENST00000265081 HBMQ6B0K9 141 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 FAAH2Q6GMR7 532 aa10.25□□□□□ -0.77
MSH3-201ENST00000265081 C16orf52Q8NHV5 167 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms