RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 TUBA8Q9NY65 449 aaPredicted RBP8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 CNIH4Q9P003 139 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 PDP1Q9P0J1 537 aaPredicted RBP8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 STOML1Q9UBI4 398 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 RPS6KB2Q9UBS0 482 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 VDAC3Q9Y277 283 aa8.86□□□□□ -0.99
SNRNP40-201ENST00000263694 A0A087WUU8 490 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 A0A0B4J2E0 115 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 A0A1B0GX12 115 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 ANKUB1A6NFN9 424 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 G3V2T6 193 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 PIP5K1CO60331 668 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 FMO6PO60774 539 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 TRIM3O75382 744 aaPredicted RBP8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 OR5F1O95221 314 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 PDGFAP04085 211 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 RFPL3SP0C7P2 107 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 FPR1P21462 350 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 CNR1P21554 472 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 MASP1P48740 699 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 HMGA2P52926 109 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 COPZ1P61923 177 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 CXADRP78310 365 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 RPP38P78345 283 aaKnown RBP8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 ST3GAL3Q11203 375 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 SNTA1Q13424 505 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 CBFBQ13951 182 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 TBR1Q16650 682 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 ALG10BQ5I7T1 473 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 COLEC12Q5KU26 742 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 WBP2NLQ6ICG8 309 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 TMEM81Q6P7N7 255 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 ZBTB49Q6ZSB9 765 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 PACS2Q86VP3 889 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 PLCZ1Q86YW0 608 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 MISPQ8IVT2 679 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 SULF2Q8IWU5 870 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 GPALPP1Q8IXQ4 340 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 LSMEM1Q8N8F7 131 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 MDS2Q8NDY4 140 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 TOR1AIP2Q8NFQ8 470 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 OR1J4Q8NGS1 313 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 HAS2Q92819 552 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 SLC35B4Q969S0 331 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 C3orf49Q96BT1 292 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 FRMD6Q96NE9 622 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 EPYCQ99645 322 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 FUZQ9BT04 418 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 SDHAF3Q9NRP4 125 aa8.85□□□□□ -0.99
SNRNP40-201ENST00000263694 PIEZO2Q9H5I5 2752 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 IGLV3-32A0A0A0MS00 114 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 A0A1W2PRQ8 180 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 SH3PXD2BA1X283 911 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 ANKRD33BA6NCL7 494 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 LRRC3CA6NJW4 275 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 KPNA4O00629 521 aaPredicted RBP8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 EI24O14681 340 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 PEX1O43933 1283 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 DPM1O60762 260 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 SP1P08047 785 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 GP1BBP13224 206 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 POU2F1P14859 743 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 ZNF26P17031 533 aaPredicted RBP8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 PGCP20142 388 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 ENDOUP21128 410 aaKnown RBP8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 TACR3P29371 465 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 DAPP51397 102 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 TMPRSS3P57727 454 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 DGCR6Q14129 220 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 TRAM2Q15035 370 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 MICAQ29983 383 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 DCST1Q5T197 706 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 TIGD3Q6B0B8 471 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 SLC25A25Q6KCM7 469 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 ZNF613Q6PF04 617 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 BORAQ6PGQ7 559 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 SHQ1Q6PI26 577 aaKnown RBP8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 PRICKLE2Q7Z3G6 844 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 GALNTL5Q7Z4T8 443 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 ZDHHC13Q8IUH4 622 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 FADS6Q8N9I5 356 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 OR2M7Q8NG81 312 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 OR4K17Q8NGC6 315 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 PFN4Q8NHR9 129 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 MAGEE2Q8TD90 523 aaPredicted RBP8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 GIPC3Q8TF64 312 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 FEVQ99581 238 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 SMAD5Q99717 465 aaKnown RBP8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 KLHL4Q9C0H6 718 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 ADAM19Q9H013 955 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 EVA1AQ9H8M9 152 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 MED17Q9NVC6 651 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 TAS2R10Q9NYW0 307 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 TMCC3Q9ULS5 477 aa8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 RPH3AQ9Y2J0 694 aaPredicted RBP8.84□□□□□ -0.99
SNRNP40-201ENST00000263694 TPRP12270 2363 aaKnown RBP8.84□□□□□ -1
SNRNP40-201ENST00000263694 EFNA2O43921 213 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 OR10H3O60404 316 aa8.83□□□□□ -1
SNRNP40-201ENST00000263694 MITFO75030 526 aaPredicted RBP8.83□□□□□ -1
SNRNP40-201ENST00000263694 CCNB2O95067 398 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms