RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 TSPAN5P62079 268 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 PUDPQ08623 228 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 ELAVL3Q14576 367 aaKnown RBP16.17■□□□□ 0.18
TRAM1-201ENST00000262213 OR1Q1Q15612 314 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 GRK1Q15835 563 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 MFSD12Q6NUT3 480 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 NLRC3Q7RTR2 1065 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 ZNF614Q8N883 585 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 ZCCHC10Q8TBK6 192 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 BRIX1Q8TDN6 353 aaKnown RBP16.17■□□□□ 0.18
TRAM1-201ENST00000262213 ZMYND19Q96E35 227 aaPredicted RBP16.17■□□□□ 0.18
TRAM1-201ENST00000262213 ZNF681Q96N22 645 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 DDOQ99489 341 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 TMEM168Q9H0V1 697 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 MTHFD2LQ9H903 347 aaPredicted RBP16.17■□□□□ 0.18
TRAM1-201ENST00000262213 ADGRL4Q9HBW9 690 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 ADAP2Q9NPF8 381 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 RCE1Q9Y256 329 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 EDDM13A0A1B0GTR0 161 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 CDK2AP1O14519 115 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 TSPAN4O14817 238 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 PPM1AP35813 382 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 GDNFP39905 211 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 VEGFCP49767 419 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 ZNF234Q14588 700 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 Q6ZTK2 550 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 RANBP3LQ86VV4 465 aaPredicted RBP16.17■□□□□ 0.18
TRAM1-201ENST00000262213 SHISA5Q8N114 240 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 TMIEQ8NEW7 156 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 TTLQ8NG68 377 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 OR52E1Q8NGJ3 308 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 LGALS14Q8TCE9 139 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 ATG2BQ96BY7 2078 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 DERL3Q96Q80 235 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 OR14A2Q96R54 314 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 JAM3Q9BX67 310 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 C20orf85Q9H1P6 137 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 RDH8Q9NYR8 311 aa16.17■□□□□ 0.18
TRAM1-201ENST00000262213 TRAPPC13A5PLN9 417 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 OTOL1A6NHN0 477 aaPredicted RBP16.16■□□□□ 0.18
TRAM1-201ENST00000262213 SLC22A31A6NKX4 558 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 RIIAD1A6NNX1 92 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 M0R233 179 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 GNB5O14775 395 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 PTHLHP12272 177 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 ATF4P18848 351 aaPredicted RBP16.16■□□□□ 0.18
TRAM1-201ENST00000262213 POLR2CP19387 275 aaPredicted RBP16.16■□□□□ 0.18
TRAM1-201ENST00000262213 LCN1P31025 176 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 PTGS2P35354 604 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 BLVRAP53004 296 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 ERVK-21P61565 698 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 SHC2P98077 582 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 TMEM255AQ5JRV8 349 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 MRPL2Q5T653 305 aaKnown RBP16.16■□□□□ 0.18
TRAM1-201ENST00000262213 HES5Q5TA89 166 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 FAAH2Q6GMR7 532 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 BTN2A1Q7KYR7 527 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 LSMEM1Q8N8F7 131 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 BPIFA2Q96DR5 249 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 ZNF436Q9C0F3 470 aaPredicted RBP16.16■□□□□ 0.18
TRAM1-201ENST00000262213 PITHD1Q9GZP4 211 aaPredicted RBP16.16■□□□□ 0.18
TRAM1-201ENST00000262213 USP34Q70CQ2 3546 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 FLRT2O43155 660 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 EPXP11678 715 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 MAGEB1P43366 347 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 MMP15P51511 669 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 FAAP20Q6NZ36 180 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 FIGNL1Q6PIW4 674 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 GPALPP1Q8IXQ4 340 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 LNX2Q8N448 690 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 MS4A15Q8N5U1 240 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 SEC22CQ9BRL7 303 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 C1QTNF7Q9BXJ2 289 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 SLC25A18Q9H1K4 315 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 SCP2D1Q9UJQ7 156 aa16.16■□□□□ 0.18
TRAM1-201ENST00000262213 TEX46H3BTG2 121 aa16.15■□□□□ 0.18
TRAM1-201ENST00000262213 DNAJB6O75190 326 aa16.15■□□□□ 0.18
TRAM1-201ENST00000262213 PAK4O96013 591 aaPredicted RBP16.15■□□□□ 0.18
TRAM1-201ENST00000262213 ALDOBP05062 364 aa16.15■□□□□ 0.18
TRAM1-201ENST00000262213 LAMP2P13473 410 aa16.15■□□□□ 0.18
TRAM1-201ENST00000262213 PSMB10P40306 273 aa16.15■□□□□ 0.18
TRAM1-201ENST00000262213 PITPNAQ00169 270 aa16.15■□□□□ 0.18
TRAM1-201ENST00000262213 TMEM52BQ4KMG9 183 aa16.15■□□□□ 0.18
TRAM1-201ENST00000262213 TRMT12Q53H54 448 aaKnown RBP16.15■□□□□ 0.18
TRAM1-201ENST00000262213 ADAMTSL4Q6UY14 1074 aa16.15■□□□□ 0.18
TRAM1-201ENST00000262213 PXKQ7Z7A4 578 aa16.15■□□□□ 0.18
TRAM1-201ENST00000262213 NRROSQ86YC3 692 aa16.15■□□□□ 0.18
TRAM1-201ENST00000262213 ZNF433Q8N7K0 673 aaPredicted RBP16.15■□□□□ 0.18
TRAM1-201ENST00000262213 OR4C6Q8NH72 309 aa16.15■□□□□ 0.18
TRAM1-201ENST00000262213 PDCD1LG2Q9BQ51 273 aa16.15■□□□□ 0.18
TRAM1-201ENST00000262213 CMC2Q9NRP2 79 aa16.15■□□□□ 0.18
TRAM1-201ENST00000262213 ZNF223Q9UK11 482 aaPredicted RBP16.15■□□□□ 0.18
TRAM1-201ENST00000262213 SCML1Q9UN30 329 aa16.15■□□□□ 0.18
TRAM1-201ENST00000262213 PSMD9O00233 223 aa16.15■□□□□ 0.18
TRAM1-201ENST00000262213 ZNF888P0CJ79 500 aaPredicted RBP16.15■□□□□ 0.18
TRAM1-201ENST00000262213 CLDN12P56749 244 aa16.15■□□□□ 0.18
TRAM1-201ENST00000262213 SLC25A25Q6KCM7 469 aa16.15■□□□□ 0.18
TRAM1-201ENST00000262213 TMEFF1Q8IYR6 380 aa16.15■□□□□ 0.18
TRAM1-201ENST00000262213 CDK20Q8IZL9 346 aa16.15■□□□□ 0.18
TRAM1-201ENST00000262213 OR2L3Q8NG85 312 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms