RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 CAMK2DQ13557 499 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 TUSC1Q2TAM9 212 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 BEX5Q5H9J7 111 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 FAM74A1Q5RGS3 127 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 ZDHHC20Q5W0Z9 365 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 HBMQ6B0K9 141 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 CD200R1LQ6Q8B3 271 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 LSMEM1Q8N8F7 131 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 POGLUT1Q8NBL1 392 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 ZPLD1Q8TCW7 415 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 WNT2BQ93097 391 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 IL21RQ9HBE5 538 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 DLL4Q9NR61 685 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 ICKQ9UPZ9 632 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 WDR45Q9Y484 360 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 MPDZO75970 2070 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 SNTNA6NMZ2 147 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 PRR23D1E9PI22 279 aaPredicted RBP12.04□□□□□ -0.48
SNX1-201ENST00000261889 KCNAB3O43448 404 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 FGF18O76093 207 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 RHOP08100 348 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 PRR23D2P0DMB1 279 aaPredicted RBP12.04□□□□□ -0.48
SNX1-201ENST00000261889 SLC7A9P82251 487 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 GALEQ14376 348 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 DUSP5Q16690 384 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 TCTE1Q5JU00 501 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 RTL4Q6ZR62 310 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 OAFQ86UD1 273 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 ZNF761Q86XN6 746 aaPredicted RBP12.04□□□□□ -0.48
SNX1-201ENST00000261889 OR52I2Q8NH67 350 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 DMRTA2Q96SC8 542 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 GINS4Q9BRT9 223 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 MGAT4CQ9UBM8 478 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 DPP7Q9UHL4 492 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 COPS3Q9UNS2 423 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 OBSL1O75147 1896 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 LOC100509620A0A075B734 347 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 FXYD6-FXYD2A0A087WZ82 144 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 TRABD2BA6NFA1 517 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 GRXCR1A8MXD5 290 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 B8ZZF3 427 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 ICAM2P13598 275 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 F3P13726 295 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 GSG1Q2KHT4 349 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 C2orf68Q2NKX9 166 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 SLC6A19Q695T7 634 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 PSRC1Q6PGN9 363 aaPredicted RBP12.03□□□□□ -0.48
SNX1-201ENST00000261889 ZNF836Q6ZNA1 936 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 C17orf107Q6ZR85 190 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 DCUN1D3Q8IWE4 304 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 GATSQ8NAP1 163 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 OR5T3Q8NGG3 340 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 OR8S1Q8NH09 359 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 RFKQ969G6 155 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 TNFRSF13CQ96RJ3 184 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 FXYD6Q9H0Q3 95 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 APOBEC3BQ9UH17 382 aaKnown RBP12.03□□□□□ -0.48
SNX1-201ENST00000261889 COL4A3Q01955 1670 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 TRANK1O15050 2925 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 A0A1W2PPL8 197 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 ADAM11O75078 769 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 TFP02787 698 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 ASGR2P07307 311 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 ADRB3P13945 408 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 ANXA11P50995 505 aaKnown RBP12.03□□□□□ -0.48
SNX1-201ENST00000261889 AKR1C2P52895 323 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 AKR1C1Q04828 323 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 ATXN7L3Q14CW9 347 aaPredicted RBP12.03□□□□□ -0.48
SNX1-201ENST00000261889 PUS10Q3MIT2 529 aaKnown RBP12.03□□□□□ -0.48
SNX1-201ENST00000261889 ARHGAP15Q53QZ3 475 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 GARNL3Q5VVW2 1013 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 NIPAL3Q6P499 406 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 C7orf61Q8IZ16 206 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 OR52E2Q8NGJ4 325 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 FBXW5Q969U6 566 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 SFXN2Q96NB2 322 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 MED18Q9BUE0 208 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 SIDT1Q9NXL6 827 aaKnown RBP12.03□□□□□ -0.48
SNX1-201ENST00000261889 PRKAG2Q9UGJ0 569 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 FBXL2Q9UKC9 423 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 LHX6Q9UPM6 363 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 SATB2Q9UPW6 733 aa12.03□□□□□ -0.48
SNX1-201ENST00000261889 A0A0G2JK05 382 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 SGK494L7N484 410 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 SEC14L5O43304 696 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 GPANK1O95872 356 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 RLN1P04808 185 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 EPCAMP16422 314 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 BMP7P18075 431 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 RAB3BP20337 219 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 HTR1FP30939 366 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 LRRC37A5PQ49AS3 106 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 ATRAIDQ6UW56 229 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 APOOLQ6UXV4 268 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 RASSF6Q6ZTQ3 369 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 FCRLAQ7L513 359 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 LRRC28Q86X40 367 aaPredicted RBP12.02□□□□□ -0.48
SNX1-201ENST00000261889 GRAMD2AQ8IUY3 354 aa12.02□□□□□ -0.48
SNX1-201ENST00000261889 FAM98AQ8NCA5 519 aaKnown RBP12.02□□□□□ -0.48
SNX1-201ENST00000261889 OR2L2Q8NH16 312 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms