RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 TIPRLO75663 272 aa14.33□□□□□ -0.11
CCDC90B-201ENST00000260054 KRT36O76013 467 aa14.33□□□□□ -0.11
CCDC90B-201ENST00000260054 CELA3AP09093 270 aa14.33□□□□□ -0.11
CCDC90B-201ENST00000260054 ITGA2P17301 1181 aa14.33□□□□□ -0.11
CCDC90B-201ENST00000260054 RHCEP18577 417 aa14.33□□□□□ -0.11
CCDC90B-201ENST00000260054 SRD5A2P31213 254 aa14.33□□□□□ -0.11
CCDC90B-201ENST00000260054 MAGEA5P43359 124 aa14.33□□□□□ -0.11
CCDC90B-201ENST00000260054 PPIAP62937 165 aaKnown RBP14.33□□□□□ -0.11
CCDC90B-201ENST00000260054 GANABQ14697 944 aaKnown RBP14.33□□□□□ -0.11
CCDC90B-201ENST00000260054 COLEC12Q5KU26 742 aa14.33□□□□□ -0.11
CCDC90B-201ENST00000260054 WBP2NLQ6ICG8 309 aa14.33□□□□□ -0.11
CCDC90B-201ENST00000260054 RPUSD3Q6P087 351 aaKnown RBP14.33□□□□□ -0.11
CCDC90B-201ENST00000260054 PLEKHM3Q6ZWE6 761 aa14.33□□□□□ -0.11
CCDC90B-201ENST00000260054 TMEM27Q9HBJ8 222 aa14.33□□□□□ -0.11
CCDC90B-201ENST00000260054 S100A14Q9HCY8 104 aa14.33□□□□□ -0.11
CCDC90B-201ENST00000260054 RHCGQ9UBD6 479 aa14.33□□□□□ -0.11
CCDC90B-201ENST00000260054 B4GALT7Q9UBV7 327 aa14.33□□□□□ -0.11
CCDC90B-201ENST00000260054 DKKL1Q9UK85 242 aa14.33□□□□□ -0.11
CCDC90B-201ENST00000260054 ACAD8Q9UKU7 415 aa14.33□□□□□ -0.11
CCDC90B-201ENST00000260054 FAM32AQ9Y421 112 aaKnown RBP14.33□□□□□ -0.11
CCDC90B-201ENST00000260054 CACNA1BQ00975 2339 aa14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 A0A0B4J2E0 115 aa14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 A0A1B0GX12 115 aa14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 ETV2O00321 342 aaPredicted RBP14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 HOXB6P17509 224 aaKnown RBP14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 HK1P19367 917 aa14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 SLC1A3P43003 542 aa14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 TAS2R41P59536 307 aa14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 FOXF1Q12946 379 aa14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 TOMM20Q15388 145 aa14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 WLSQ5T9L3 541 aa14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 ZFP1Q6P2D0 407 aa14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 ZNF613Q6PF04 617 aa14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 ZNF605Q86T29 641 aa14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 SLC22A16Q86VW1 577 aa14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 FAM83FQ8NEG4 500 aaPredicted RBP14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 POC1BQ8TC44 478 aa14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 ST8SIA1Q92185 356 aa14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 STMN2Q93045 179 aa14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 C3orf49Q96BT1 292 aa14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 PIP5K1AQ99755 562 aa14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 CXorf56Q9H5V9 222 aa14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 ACER3Q9NUN7 267 aa14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 RPH3AQ9Y2J0 694 aaPredicted RBP14.33□□□□□ -0.12
CCDC90B-201ENST00000260054 ATRXP46100 2492 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 TRAPPC13A5PLN9 417 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 ACOT7O00154 380 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 TRAPPC6AO75865 159 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 OR5F1O95221 314 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 LYPD3O95274 346 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 NTN1O95631 604 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 SFTPCP11686 197 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 GP1BBP13224 206 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 ZNF24P17028 368 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 TACR3P29371 465 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 CDH12P55289 794 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 DLX5P56178 289 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 SNCBQ16143 134 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 SLC25A53Q5H9E4 307 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 YRDCQ86U90 279 aaKnown RBP14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 CYP4Z1Q86W10 505 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 OFCC1Q8IZS5 231 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 FAM109AQ8N4B1 249 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 TEX19Q8NA77 164 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 OR5M1Q8NGP8 315 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 TMEM234Q8WY98 164 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 SLC41A3Q96GZ6 507 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 ZNF347Q96SE7 839 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 OR2B2Q9GZK3 357 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 POLR2J2Q9GZM3 115 aaKnown RBP14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 ADAM19Q9H013 955 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 POLR2J3Q9H1A7 115 aaKnown RBP14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 MAN2C1Q9NTJ4 1040 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 RPS6KB2Q9UBS0 482 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 RIMS3Q9UJD0 308 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 SLC7A7Q9UM01 511 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 TESMINQ9Y4I5 508 aa14.32□□□□□ -0.12
CCDC90B-201ENST00000260054 A0A087WZY1 265 aa14.31□□□□□ -0.12
CCDC90B-201ENST00000260054 FAM47E-STBD1D6RA91 191 aa14.31□□□□□ -0.12
CCDC90B-201ENST00000260054 CST1P01037 141 aa14.31□□□□□ -0.12
CCDC90B-201ENST00000260054 HPNP05981 417 aa14.31□□□□□ -0.12
CCDC90B-201ENST00000260054 FOXD4Q12950 439 aaPredicted RBP14.31□□□□□ -0.12
CCDC90B-201ENST00000260054 INAQ16352 499 aa14.31□□□□□ -0.12
CCDC90B-201ENST00000260054 ALG10BQ5I7T1 473 aa14.31□□□□□ -0.12
CCDC90B-201ENST00000260054 WIPI1Q5MNZ9 446 aaPredicted RBP14.31□□□□□ -0.12
CCDC90B-201ENST00000260054 AAGABQ6PD74 315 aa14.31□□□□□ -0.12
CCDC90B-201ENST00000260054 ULK3Q6PHR2 472 aa14.31□□□□□ -0.12
CCDC90B-201ENST00000260054 GRINAQ7Z429 371 aa14.31□□□□□ -0.12
CCDC90B-201ENST00000260054 GDF7Q7Z4P5 450 aa14.31□□□□□ -0.12
CCDC90B-201ENST00000260054 ATG4DQ86TL0 474 aaPredicted RBP14.31□□□□□ -0.12
CCDC90B-201ENST00000260054 OR14L1PQ8NHC6 308 aa14.31□□□□□ -0.12
CCDC90B-201ENST00000260054 ZBTB8AQ96BR9 441 aa14.31□□□□□ -0.12
CCDC90B-201ENST00000260054 MRGPRX4Q96LA9 322 aa14.31□□□□□ -0.12
CCDC90B-201ENST00000260054 UBL7Q96S82 380 aaPredicted RBP14.31□□□□□ -0.12
CCDC90B-201ENST00000260054 ZDHHC11Q9H8X9 412 aa14.31□□□□□ -0.12
CCDC90B-201ENST00000260054 NMNAT1Q9HAN9 279 aaPredicted RBP14.31□□□□□ -0.12
CCDC90B-201ENST00000260054 QPCTLQ9NXS2 382 aa14.31□□□□□ -0.12
CCDC90B-201ENST00000260054 OSGIN1Q9UJX0 560 aa14.31□□□□□ -0.12
CCDC90B-201ENST00000260054 MRPS18CQ9Y3D5 142 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms