RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.9■□□□□ 0.3
TM6SF1-201ENST00000258909 RAB3IL1Q8TBN0 382 aa16.9■□□□□ 0.3
TM6SF1-201ENST00000258909 OR5B2Q96R09 309 aa16.9■□□□□ 0.3
TM6SF1-201ENST00000258909 ZNF350Q9GZX5 532 aa16.9■□□□□ 0.3
TM6SF1-201ENST00000258909 LAT2Q9GZY6 243 aa16.9■□□□□ 0.3
TM6SF1-201ENST00000258909 PRSS51A0A1B0GVH4 220 aa16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 TRIM64A6NGJ6 449 aa16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 TRIM64BA6NI03 449 aa16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 ANKRD28O15084 1053 aa16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 TM9SF1O15321 606 aa16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 BCAS1O75363 584 aaPredicted RBP16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 AK1P00568 194 aa16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 ADAP00813 363 aa16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 UQCRC2P22695 453 aa16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 NR1H2P55055 460 aa16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 SESN3P58005 492 aa16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 RAC3P60763 192 aa16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 SPANXN4Q5MJ08 99 aa16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 CEP85LQ5SZL2 805 aa16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 TYW3Q6IPR3 259 aaKnown RBP16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 HEPHL1Q6MZM0 1159 aa16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 STEAP2Q8NFT2 490 aa16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 ZG16BQ96DA0 208 aa16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 DNAJA3Q96EY1 480 aa16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 PAIP2Q9BPZ3 127 aaKnown RBP16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 PSD2Q9BQI7 771 aa16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 SSU72Q9NP77 194 aaKnown RBP16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 EXD2Q9NVH0 621 aa16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 ING1Q9UK53 422 aaPredicted RBP16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 FN1P02751 2386 aaKnown RBP16.89■□□□□ 0.29
TM6SF1-201ENST00000258909 ZNF814B7Z6K7 855 aa16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 ETV2O00321 342 aaPredicted RBP16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 SMAD9O15198 467 aaKnown RBP16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 LY6G6DO95868 133 aa16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 LBPP18428 481 aa16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 IL32P24001 234 aa16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 EDNRAP25101 427 aa16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 PTH2RP49190 550 aa16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 FUT5Q11128 374 aa16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 MERTKQ12866 999 aa16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 STX3Q13277 289 aa16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 SFRP5Q5T4F7 317 aa16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 ANXA8L1Q5VT79 327 aa16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 C3orf33Q6P1S2 294 aa16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 EIF3MQ7L2H7 374 aaKnown RBP16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 ATG4DQ86TL0 474 aaPredicted RBP16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 SLC43A2Q8N370 569 aa16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 MIPOL1Q8TD10 442 aa16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 TEX37Q96LM6 180 aa16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 ZNF300Q96RE9 604 aaPredicted RBP16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 TMEM204Q9BSN7 226 aa16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 PRSS50Q9UI38 385 aa16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 WDR45Q9Y484 360 aa16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 CADP27708 2225 aa16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 CSPG4Q6UVK1 2322 aa16.88■□□□□ 0.29
TM6SF1-201ENST00000258909 RYKP34925 604 aa16.87■□□□□ 0.29
TM6SF1-201ENST00000258909 RASGEF1BQ0VAM2 473 aa16.87■□□□□ 0.29
TM6SF1-201ENST00000258909 BST1Q10588 318 aa16.87■□□□□ 0.29
TM6SF1-201ENST00000258909 CAPRIN1Q14444 709 aaKnown RBP16.87■□□□□ 0.29
TM6SF1-201ENST00000258909 CASP8Q14790 479 aa16.87■□□□□ 0.29
TM6SF1-201ENST00000258909 TAB1Q15750 504 aa16.87■□□□□ 0.29
TM6SF1-201ENST00000258909 FAM174BQ3ZCQ3 159 aa16.87■□□□□ 0.29
TM6SF1-201ENST00000258909 ATAD3BQ5T9A4 648 aa16.87■□□□□ 0.29
TM6SF1-201ENST00000258909 SAXO2Q658L1 398 aa16.87■□□□□ 0.29
TM6SF1-201ENST00000258909 VPS37AQ8NEZ2 397 aa16.87■□□□□ 0.29
TM6SF1-201ENST00000258909 IGFBPL1Q8WX77 278 aa16.87■□□□□ 0.29
TM6SF1-201ENST00000258909 ST8SIA1Q92185 356 aa16.87■□□□□ 0.29
TM6SF1-201ENST00000258909 AKAP1Q92667 903 aaKnown RBP eCLIP16.87■□□□□ 0.29
TM6SF1-201ENST00000258909 TESCQ96BS2 214 aa16.87■□□□□ 0.29
TM6SF1-201ENST00000258909 ROPN1LQ96C74 230 aa16.87■□□□□ 0.29
TM6SF1-201ENST00000258909 COX4I2Q96KJ9 171 aa16.87■□□□□ 0.29
TM6SF1-201ENST00000258909 TACO1Q9BSH4 297 aaKnown RBP16.87■□□□□ 0.29
TM6SF1-201ENST00000258909 HDHD5Q9BXW7 423 aa16.87■□□□□ 0.29
TM6SF1-201ENST00000258909 OR10A4Q9H209 315 aa16.87■□□□□ 0.29
TM6SF1-201ENST00000258909 GP6Q9HCN6 339 aa16.87■□□□□ 0.29
TM6SF1-201ENST00000258909 KLHL9Q9P2J3 617 aa16.87■□□□□ 0.29
TM6SF1-201ENST00000258909 MARCOQ9UEW3 520 aaPredicted RBP16.87■□□□□ 0.29
TM6SF1-201ENST00000258909 PRAMEF27A3QJZ7 478 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 CLDN24A6NM45 220 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 HS3ST1O14792 307 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 CLOCKO15516 846 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 KIAA0513O60268 411 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 DNAJA2O60884 412 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 ALDOCP09972 364 aaKnown RBP16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 PGCP20142 388 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 S100A3P33764 101 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 CHI3L1P36222 383 aaPredicted RBP16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 PGM1P36871 562 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 DIO1P49895 249 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 UFM1P61960 85 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 PRSS57Q6UWY2 283 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 ANKRD42Q8N9B4 389 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 TMEM171Q8WVE6 324 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 NEUROG1Q92886 237 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 KISS1RQ969F8 398 aaPredicted RBP16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 ARL8AQ96BM9 186 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 SLC35A5Q9BS91 424 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 GSX2Q9BZM3 304 aa16.86■□□□□ 0.29
TM6SF1-201ENST00000258909 BCO1Q9HAY6 547 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms