RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 FABP12A6NFH5 140 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 C12orf71A8MTZ7 269 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 ADAM11O75078 769 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 ALX3O95076 343 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 HBQ1P09105 142 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 MYL9P24844 172 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 CRYZQ08257 329 aaKnown RBP13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 RNF44Q7L0R7 432 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 SAMD14Q8IZD0 417 aaPredicted RBP13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 PMEPA1Q969W9 287 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 DPYSL5Q9BPU6 564 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 HDHD5Q9BXW7 423 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 NLKQ9UBE8 527 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 MRPS33Q9Y291 106 aaKnown RBP13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 A0A0X1KG70 313 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 FOXS1O43638 330 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 DPM1O60762 260 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 TP53P04637 393 aaPredicted RBP13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 MAKP20794 623 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 C1orf94Q6P1W5 598 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 ATP6V1C2Q8NEY4 427 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 GNPDA2Q8TDQ7 276 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 ACOT11Q8WXI4 607 aaPredicted RBP13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 PTGFRNQ9P2B2 879 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 RPS6KB2Q9UBS0 482 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 CLEC4AQ9UMR7 237 aa13.53□□□□□ -0.24
TRAFD1-201ENST00000257604 IGKV1D-16P01601 117 aa13.52□□□□□ -0.24
TRAFD1-201ENST00000257604 CSF3P09919 207 aa13.52□□□□□ -0.24
TRAFD1-201ENST00000257604 ETV6P41212 452 aa13.52□□□□□ -0.24
TRAFD1-201ENST00000257604 CRYBB2P43320 205 aa13.52□□□□□ -0.24
TRAFD1-201ENST00000257604 CAPZBP47756 277 aa13.52□□□□□ -0.24
TRAFD1-201ENST00000257604 MTNR1AP48039 350 aa13.52□□□□□ -0.24
TRAFD1-201ENST00000257604 PSPHP78330 225 aa13.52□□□□□ -0.24
TRAFD1-201ENST00000257604 ARHGAP11BQ3KRB8 267 aa13.52□□□□□ -0.24
TRAFD1-201ENST00000257604 FAM69BQ5VUD6 431 aa13.52□□□□□ -0.24
TRAFD1-201ENST00000257604 OR5M10Q6IEU7 315 aa13.52□□□□□ -0.24
TRAFD1-201ENST00000257604 LRRC17Q8N6Y2 441 aa13.52□□□□□ -0.24
TRAFD1-201ENST00000257604 OR52I1Q8NGK6 324 aa13.52□□□□□ -0.24
TRAFD1-201ENST00000257604 SECISBP2Q96T21 854 aaKnown RBP13.52□□□□□ -0.24
TRAFD1-201ENST00000257604 ORAI3Q9BRQ5 295 aa13.52□□□□□ -0.24
TRAFD1-201ENST00000257604 CDCP1Q9H5V8 836 aa13.52□□□□□ -0.24
TRAFD1-201ENST00000257604 CMAHPQ9Y471 501 aa13.52□□□□□ -0.24
TRAFD1-201ENST00000257604 PCDHGB2Q9Y5G2 931 aa13.52□□□□□ -0.24
TRAFD1-201ENST00000257604 RNF215Q9Y6U7 377 aa13.52□□□□□ -0.24
TRAFD1-201ENST00000257604 SPTBN2O15020 2390 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 A0A0G2JMP0 313 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 HMX3A6NHT5 357 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 C17orf105B2RV13 164 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 PSMD9O00233 223 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 MPZL2O60487 215 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 CELP19835 753 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 CSTF2P33240 577 aaKnown RBP eCLIP13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 SDC2P34741 201 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 RPL4P36578 427 aaKnown RBP13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 HCCSP53701 268 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 RAB38P57729 211 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 PSG6Q00889 435 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 SCN1BQ07699 218 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 C16orf47Q6ZP98 133 aaPredicted RBP13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 RTTNQ86VV8 2226 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 YIPF7Q8N8F6 280 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 OR10H4Q8NGA5 316 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 C16orf52Q8NHV5 167 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 ENKURQ8TC29 256 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 FANK1Q8TC84 345 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 TMEM239Q8WW34 195 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 CDCA4Q9BXL8 241 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 OR52D1Q9H346 318 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 FOLH1BQ9HBA9 442 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 TMEM27Q9HBJ8 222 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 SLC2A4RGQ9NR83 387 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 FLRT3Q9NZU0 649 aa13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 MRPS17Q9Y2R5 130 aaKnown RBP13.52□□□□□ -0.25
TRAFD1-201ENST00000257604 HEATR5AQ86XA9 2040 aa13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 B4DXG7 233 aa13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 PDGFBP01127 241 aaPredicted RBP13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 YES1P07947 543 aa13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 GLULP15104 373 aa13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 CD1CP29017 333 aa13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 KIR2DL3P43628 341 aa13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 GNG2P59768 71 aa13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 HNRNPKP61978 463 aaKnown RBP eCLIP13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 ZP2Q05996 745 aa13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 DUSP8Q13202 625 aa13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 NDUFA9Q16795 377 aa13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 CRTC2Q53ET0 693 aaPredicted RBP13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 ALG10BQ5I7T1 473 aa13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 LAPTM4BQ86VI4 370 aa13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 CDK20Q8IZL9 346 aa13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 PHOSPHO1Q8TCT1 267 aa13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 RNF170Q96K19 258 aa13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 TAPBPLQ9BX59 468 aa13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 GRIP1Q9Y3R0 1128 aa13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 HSPB11Q9Y547 144 aa13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 A0A1W2PPK0 400 aa13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 SCG5P05408 212 aa13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 PAICSP22234 425 aaKnown RBP13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 ITPKBP27987 946 aa13.51□□□□□ -0.25
TRAFD1-201ENST00000257604 PRKAR1BP31321 381 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms