RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 DUSP19Q8WTR2 217 aa8.64□□□□□ -1.03
NIP7-202ENST00000254941 FBLIM1Q8WUP2 373 aa8.64□□□□□ -1.03
NIP7-202ENST00000254941 C3orf49Q96BT1 292 aa8.64□□□□□ -1.03
NIP7-202ENST00000254941 SH3YL1Q96HL8 342 aaPredicted RBP8.64□□□□□ -1.03
NIP7-202ENST00000254941 FAM46AQ96IP4 442 aaKnown RBP8.64□□□□□ -1.03
NIP7-202ENST00000254941 IP6K3Q96PC2 410 aa8.64□□□□□ -1.03
NIP7-202ENST00000254941 CCNL2Q96S94 520 aaPredicted RBP8.64□□□□□ -1.03
NIP7-202ENST00000254941 APOL4Q9BPW4 351 aa8.64□□□□□ -1.03
NIP7-202ENST00000254941 CDCP1Q9H5V8 836 aa8.64□□□□□ -1.03
NIP7-202ENST00000254941 ZNF696Q9H7X3 374 aa8.64□□□□□ -1.03
NIP7-202ENST00000254941 KRCC1Q9NPI7 259 aaPredicted RBP8.64□□□□□ -1.03
NIP7-202ENST00000254941 SELENONQ9NZV5 590 aa8.64□□□□□ -1.03
NIP7-202ENST00000254941 CNIH4Q9P003 139 aa8.64□□□□□ -1.03
NIP7-202ENST00000254941 MED31Q9Y3C7 131 aa8.64□□□□□ -1.03
NIP7-202ENST00000254941 C17orf51A8MQB3 221 aa8.63□□□□□ -1.03
NIP7-202ENST00000254941 PIP5K1CO60331 668 aa8.63□□□□□ -1.03
NIP7-202ENST00000254941 MAN1A2O60476 641 aa8.63□□□□□ -1.03
NIP7-202ENST00000254941 SLC1A3P43003 542 aa8.63□□□□□ -1.03
NIP7-202ENST00000254941 TPD52P55327 224 aaPredicted RBP8.63□□□□□ -1.03
NIP7-202ENST00000254941 CTBP2P56545 445 aa8.63□□□□□ -1.03
NIP7-202ENST00000254941 CD47Q08722 323 aa8.63□□□□□ -1.03
NIP7-202ENST00000254941 CAMK2BQ13554 666 aa8.63□□□□□ -1.03
NIP7-202ENST00000254941 ATP1A4Q13733 1029 aa8.63□□□□□ -1.03
NIP7-202ENST00000254941 RTP5Q14D33 572 aa8.63□□□□□ -1.03
NIP7-202ENST00000254941 FCRLBQ6BAA4 426 aa8.63□□□□□ -1.03
NIP7-202ENST00000254941 TMEM81Q6P7N7 255 aa8.63□□□□□ -1.03
NIP7-202ENST00000254941 TTC33Q6PID6 262 aaPredicted RBP8.63□□□□□ -1.03
NIP7-202ENST00000254941 RNF217Q8TC41 542 aa8.63□□□□□ -1.03
NIP7-202ENST00000254941 KIAA1143Q96AT1 154 aaPredicted RBP8.63□□□□□ -1.03
NIP7-202ENST00000254941 ZNF524Q96C55 264 aa8.63□□□□□ -1.03
NIP7-202ENST00000254941 KLHDC3Q9BQ90 382 aa8.63□□□□□ -1.03
NIP7-202ENST00000254941 ADAM19Q9H013 955 aa8.63□□□□□ -1.03
NIP7-202ENST00000254941 ING2Q9H160 280 aa8.63□□□□□ -1.03
NIP7-202ENST00000254941 GPN2Q9H9Y4 310 aaPredicted RBP8.63□□□□□ -1.03
NIP7-202ENST00000254941 MEPEQ9NQ76 525 aaPredicted RBP8.63□□□□□ -1.03
NIP7-202ENST00000254941 TMEM5Q9Y2B1 443 aa8.63□□□□□ -1.03
NIP7-202ENST00000254941 MYRFQ9Y2G1 1151 aa8.63□□□□□ -1.03
NIP7-202ENST00000254941 CHCHD2Q9Y6H1 151 aaPredicted RBP8.63□□□□□ -1.03
NIP7-202ENST00000254941 ZFHX4Q86UP3 3567 aa8.63□□□□□ -1.03
NIP7-202ENST00000254941 TRIM64A6NGJ6 449 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 H3BN98 237 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 TP53I11O14683 189 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 GFRA3O60609 400 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 SOX14O95416 240 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 PNMTP11086 282 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 LIPCP11150 499 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 PGCP20142 388 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 ITPKBP27987 946 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 PTGDSP41222 190 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 CASP3P42574 277 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 GPR4P46093 362 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 SSR4P51571 173 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 NUP107P57740 925 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 SNTA1Q13424 505 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 CBFBQ13951 182 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 TGIF1Q15583 401 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 CTU2Q2VPK5 515 aaKnown RBP8.62□□□□□ -1.03
NIP7-202ENST00000254941 ISLR2Q6UXK2 745 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 RASSF6Q6ZTQ3 369 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 TMPRSS11FQ6ZWK6 438 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 ATG4DQ86TL0 474 aaPredicted RBP8.62□□□□□ -1.03
NIP7-202ENST00000254941 MEX3DQ86XN8 651 aaKnown RBP8.62□□□□□ -1.03
NIP7-202ENST00000254941 ZNF786Q8N393 782 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 PFN4Q8NHR9 129 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 B4GALNT2Q8NHY0 566 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 ZNF563Q8TA94 476 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 ASB15Q8WXK1 588 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 PSMF1Q92530 271 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 BPIFA2Q96DR5 249 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 SECISBP2Q96T21 854 aaKnown RBP8.62□□□□□ -1.03
NIP7-202ENST00000254941 YTHDF1Q9BYJ9 559 aaKnown RBP8.62□□□□□ -1.03
NIP7-202ENST00000254941 C12orf10Q9HB07 376 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 GALNT9Q9HCQ5 603 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 C20orf141Q9NUB4 165 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 IL20Q9NYY1 176 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 KLRF1Q9NZS2 232 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 SCOCQ9UIL1 159 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 FRYQ5TBA9 3013 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 IGLV3-32A0A0A0MS00 114 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 EIF4E1BA6NMX2 242 aaKnown RBP8.62□□□□□ -1.03
NIP7-202ENST00000254941 B4DXG7 233 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 CDC42EP2O14613 210 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 CDC40O60508 579 aaKnown RBP eCLIP8.62□□□□□ -1.03
NIP7-202ENST00000254941 NUDT14O95848 222 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 IGFBP1P08833 259 aaPredicted RBP8.62□□□□□ -1.03
NIP7-202ENST00000254941 IFI30P13284 250 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 PTNP21246 168 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 POU1F1P28069 291 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 ELK4P28324 431 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 SUMO3P55854 103 aaPredicted RBP8.62□□□□□ -1.03
NIP7-202ENST00000254941 IL5RAQ01344 420 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 CDK5R2Q13319 367 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 BLMHQ13867 455 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 MAD2L1BPQ15013 274 aaPredicted RBP8.62□□□□□ -1.03
NIP7-202ENST00000254941 TOMM34Q15785 309 aaPredicted RBP8.62□□□□□ -1.03
NIP7-202ENST00000254941 MEP1AQ16819 746 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 COL28A1Q2UY09 1125 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 KCTD21Q4G0X4 260 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 DCAF10Q5QP82 559 aa8.62□□□□□ -1.03
NIP7-202ENST00000254941 C6orf141Q5SZD1 244 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms