RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 GABRB3P28472 473 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 PRDX1Q06830 199 aaKnown RBP17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 ELF4Q99607 663 aaPredicted RBP17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 DNAJB5O75953 348 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 MPP7Q5T2T1 576 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 COX15Q7KZN9 410 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 FNDC8Q8TC99 324 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 WFDC5Q8TCV5 224 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 RSC1A1Q92681 617 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 B8ZZF3 427 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 LUMP51884 338 aaPredicted RBP17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 SPARTQ8N0X7 666 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 GTF2H4Q92759 462 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 BTBD2Q9BX70 525 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 MARCH5Q9NX47 278 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 RASD1Q9Y272 281 aa17.47■□□□□ 0.39
SMARCC1-201ENST00000254480 SIGLEC6O43699 453 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 CCSMST1Q4G0I0 132 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 OR1S1Q8NH92 325 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 PHB2Q99623 299 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 SLC35A3Q9Y2D2 325 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 A6NIZ1 184 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 GPR75O95800 540 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 EGFP01133 1207 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 HTR2AP28223 471 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 RAP1BP61224 184 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 RAP1AP62834 184 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 ALKAL1Q6UXT8 129 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 GOLM1Q8NBJ4 401 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 ZFP90Q8TF47 636 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 C1QTNF2Q9BXJ5 285 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 GPN2Q9H9Y4 310 aaPredicted RBP17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 MYH7BA7E2Y1 1941 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 CBX7O95931 251 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 TFP02787 698 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 S100PP25815 95 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 IMPA1P29218 277 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 DESI1Q6ICB0 168 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 FAM83FQ8NEG4 500 aaPredicted RBP17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 AGPAT4Q9NRZ5 378 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 TMEM269A0A1B0GVZ9 245 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 KCNJ10P78508 379 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 CAMK2DQ13557 499 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 OR8J2Q8NGG1 315 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 SYT3Q9BQG1 590 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 ELOVL3Q9HB03 270 aa17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 CNOT11Q9UKZ1 510 aaKnown RBP17.46■□□□□ 0.39
SMARCC1-201ENST00000254480 CASC3O15234 703 aaKnown RBP17.46■□□□□ 0.38
SMARCC1-201ENST00000254480 PENKP01210 267 aaPredicted RBP17.46■□□□□ 0.38
SMARCC1-201ENST00000254480 ZNF136P52737 540 aa17.46■□□□□ 0.38
SMARCC1-201ENST00000254480 TECPR1Q7Z6L1 1165 aa17.46■□□□□ 0.38
SMARCC1-201ENST00000254480 FAM86C1Q9NVL1 165 aa17.46■□□□□ 0.38
SMARCC1-201ENST00000254480 IGFBP6P24592 240 aaPredicted RBP17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 IRS1P35568 1242 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 CLDN12P56749 244 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 NUDT8Q8WV74 236 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 ZBED3Q96IU2 234 aaPredicted RBP17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 SRPK3Q9UPE1 567 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 ALDOBP05062 364 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 ZNF704Q6ZNC4 412 aaPredicted RBP17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 OR10A5Q9H207 317 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 OR10A2Q9H208 303 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 APMAPQ9HDC9 416 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 RLIMQ9NVW2 624 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 SIT1Q9Y3P8 196 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 ZNF736B4DX44 427 aaPredicted RBP17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 GASTP01350 101 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 ERP29P30040 261 aaKnown RBP17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 POLR2IP36954 125 aaKnown RBP17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 KEAP1Q14145 624 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 HNF4GQ14541 408 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 BEX5Q5H9J7 111 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 C19orf47Q8N9M1 422 aaKnown RBP17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 ACOT11Q8WXI4 607 aaPredicted RBP17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 TAS2R16Q9NYV7 291 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 SOCS7O14512 581 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 ZFAND5O76080 213 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 METTL25Q8N6Q8 603 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 SLC39A13Q96H72 371 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 TIMM29Q9BSF4 260 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 ULBP2Q9BZM5 246 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 C4BP0C0L5 1744 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 AP1G1O43747 822 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 PKDCCQ504Y2 493 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 CNOT9Q92600 299 aaKnown RBP17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 ELMOD3Q96FG2 381 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 SLC6A18Q96N87 628 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 BIRC8Q96P09 236 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 MYADMQ96S97 322 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 THAP7Q9BT49 309 aaPredicted RBP17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 DHRS4Q9BTZ2 278 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 UBQLN4Q9NRR5 601 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 ZNF337Q9Y3M9 751 aa17.45■□□□□ 0.38
SMARCC1-201ENST00000254480 SOCS6O14544 535 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 OR2T1O43869 369 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 EMX1Q04741 257 aaPredicted RBP17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 FGL1Q08830 312 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 ARHGAP19Q14CB8 494 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 DEDD2Q8WXF8 326 aa17.44■□□□□ 0.38
SMARCC1-201ENST00000254480 USB1Q9BQ65 265 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms