RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 SLC9A3P48764 834 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 SLC16A1P53985 500 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 ZNF613Q6PF04 617 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 CD200R1LQ6Q8B3 271 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 CCBE1Q6UXH8 406 aaPredicted RBP17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 CADM2Q8N3J6 435 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 CELF2-AS1Q8N7Q2 184 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 ARIH2OSQ8N7S6 290 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 CYB561A3Q8NBI2 242 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 PTP4A1Q93096 173 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 TGM7Q96PF1 710 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 TIMP4Q99727 224 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 OR51V1Q9H2C8 321 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 SIAEQ9HAT2 523 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 TIGARQ9NQ88 270 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 PRTFDC1Q9NRG1 225 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 A0A1B0GVT2 93 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 CD8B2A6NJW9 211 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 CD8BP10966 210 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 MEPCEQ7L2J0 689 aaKnown RBP17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 CDK20Q8IZL9 346 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 SLC37A3Q8NCC5 494 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 MMABQ96EY8 250 aaPredicted RBP17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 SLC38A3Q99624 504 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 CCDC32Q9BV29 185 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 POLE3Q9NRF9 147 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 ERVK-19Q9WJR5 959 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 C2orf92A0A1B0GVN3 265 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 LINC00854A0A1B0GVQ3 168 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 LMO7DNF2Z398 122 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 CHP2O43745 196 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 CTNSO60931 367 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 PPP1R3DO95685 299 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 PAICSP22234 425 aaKnown RBP17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 HOXA6P31267 233 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 DHPSP49366 369 aaPredicted RBP17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 RPS7P62081 194 aaKnown RBP17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 ALG10BQ5I7T1 473 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 NKAIN2Q5VXU1 208 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 GID4Q8IVV7 300 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 WDFY2Q96P53 400 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 DGAT2Q96PD7 388 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 TNFRSF13CQ96RJ3 184 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 MARCH7Q9H992 704 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 LRIT1Q9P2V4 623 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 TRAPPC4Q9Y296 219 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 SIRT4Q9Y6E7 314 aaPredicted RBP17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 IGHV5-51A0A0C4DH38 117 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 CCDC163A0A0D9SF12 145 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 AKAP8O43823 692 aaKnown RBP17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 RCBTB2O95199 551 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 GYPBP06028 91 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 IFI6P09912 130 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 FASLGP48023 281 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 CBX3Q13185 183 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 ZNF362Q5T0B9 420 aaPredicted RBP17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 MARCH9Q86YJ5 346 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 ATP6V1C2Q8NEY4 427 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 OR52N1Q8NH53 320 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 TCTN2Q96GX1 697 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 LMF1Q96S06 567 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 SRRQ9GZT4 340 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 CMC2Q9NRP2 79 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 C14orf105Q9NVL8 296 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 SOHLH2Q9NX45 425 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 MAU2Q9Y6X3 613 aa17.22■□□□□ 0.35
PDLIM4-201ENST00000253754 CUL9Q8IWT3 2517 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 LRRN3E7EW58 273 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 GABRPO00591 440 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 CASKO14936 926 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 LAMTOR5O43504 91 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 SRPX2O60687 465 aaPredicted RBP17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 PTP4A3O75365 173 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 CT45A8P0DMV1 189 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 CT45A9P0DMV2 189 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 FGF9P31371 208 aaPredicted RBP17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 MLLT3P42568 568 aaPredicted RBP17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 CTBP2P56545 445 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 DEFA1P59665 94 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 DEFA3P59666 94 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 CRYZQ08257 329 aaKnown RBP17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 FHL1Q13642 323 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 CRMP1Q14194 572 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 CT45A2Q5DJT8 189 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 KIRREL2Q6UWL6 708 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 FAM131AQ6UXB0 335 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 OAFQ86UD1 273 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 OR10H4Q8NGA5 316 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 C16orf52Q8NHV5 167 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 EDAQ92838 391 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 MED18Q9BUE0 208 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 ALG8Q9BVK2 526 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 SPRTNQ9H040 489 aaPredicted RBP17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 LRRN3Q9H3W5 708 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 TMEM5Q9Y2B1 443 aa17.21■□□□□ 0.35
PDLIM4-201ENST00000253754 TRDV1A0A1B0GX56 115 aa17.21■□□□□ 0.34
PDLIM4-201ENST00000253754 SLC35F4A4IF30 521 aa17.21■□□□□ 0.34
PDLIM4-201ENST00000253754 CCDC182A6NF36 153 aa17.21■□□□□ 0.34
PDLIM4-201ENST00000253754 SNPHO15079 494 aa17.21■□□□□ 0.34
PDLIM4-201ENST00000253754 PIAS2O75928 621 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms