RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 PGCP20142 388 aa20.54■□□□□ 0.88
LSM4-201ENST00000252816 CAPN3P20807 821 aa20.54■□□□□ 0.88
LSM4-201ENST00000252816 RYKP34925 604 aa20.54■□□□□ 0.88
LSM4-201ENST00000252816 CPOXP36551 454 aa20.54■□□□□ 0.88
LSM4-201ENST00000252816 ATP4BP51164 291 aa20.54■□□□□ 0.88
LSM4-201ENST00000252816 DSTNP60981 165 aa20.54■□□□□ 0.88
LSM4-201ENST00000252816 FAM214BQ7L5A3 538 aa20.54■□□□□ 0.88
LSM4-201ENST00000252816 TMEM200AQ86VY9 491 aa20.54■□□□□ 0.88
LSM4-201ENST00000252816 SLC38A5Q8WUX1 472 aa20.54■□□□□ 0.88
LSM4-201ENST00000252816 STON2Q8WXE9 905 aa20.54■□□□□ 0.88
LSM4-201ENST00000252816 ROBO4Q8WZ75 1007 aa20.54■□□□□ 0.88
LSM4-201ENST00000252816 ACER3Q9NUN7 267 aa20.54■□□□□ 0.88
LSM4-201ENST00000252816 SLAMF8Q9P0V8 285 aa20.54■□□□□ 0.88
LSM4-201ENST00000252816 P2RX2Q9UBL9 471 aa20.54■□□□□ 0.88
LSM4-201ENST00000252816 CCDC168Q8NDH2 2452 aa20.53■□□□□ 0.88
LSM4-201ENST00000252816 A0A096LPI6 279 aa20.53■□□□□ 0.88
LSM4-201ENST00000252816 GJE1A6NN92 205 aa20.53■□□□□ 0.88
LSM4-201ENST00000252816 CTAG2O75638 210 aa20.53■□□□□ 0.88
LSM4-201ENST00000252816 TFPTP0C1Z6 253 aa20.53■□□□□ 0.88
LSM4-201ENST00000252816 FAM27E3Q08E93 113 aa20.53■□□□□ 0.88
LSM4-201ENST00000252816 SQLEQ14534 574 aa20.53■□□□□ 0.88
LSM4-201ENST00000252816 ZNF239Q16600 458 aaKnown RBP20.53■□□□□ 0.88
LSM4-201ENST00000252816 AGKQ53H12 422 aa20.53■□□□□ 0.88
LSM4-201ENST00000252816 PAGE3Q5JUK9 113 aa20.53■□□□□ 0.88
LSM4-201ENST00000252816 PLEKHM3Q6ZWE6 761 aa20.53■□□□□ 0.88
LSM4-201ENST00000252816 MSRB3Q8IXL7 192 aa20.53■□□□□ 0.88
LSM4-201ENST00000252816 TMEM234Q8WY98 164 aa20.53■□□□□ 0.88
LSM4-201ENST00000252816 GMPPAQ96IJ6 420 aaPredicted RBP20.53■□□□□ 0.88
LSM4-201ENST00000252816 NPHS2Q9NP85 383 aa20.53■□□□□ 0.88
LSM4-201ENST00000252816 EXOSC3Q9NQT5 275 aaKnown RBP20.53■□□□□ 0.88
LSM4-201ENST00000252816 SLC25A37Q9NYZ2 338 aa20.53■□□□□ 0.88
LSM4-201ENST00000252816 HRNRQ86YZ3 2850 aaPredicted RBP20.52■□□□□ 0.88
LSM4-201ENST00000252816 A0A1W2PNR3 127 aa20.52■□□□□ 0.88
LSM4-201ENST00000252816 FAM221AA4D161 298 aa20.52■□□□□ 0.88
LSM4-201ENST00000252816 CLIC1O00299 241 aa20.52■□□□□ 0.88
LSM4-201ENST00000252816 SS18L1O75177 396 aaPredicted RBP20.52■□□□□ 0.88
LSM4-201ENST00000252816 BCHEP06276 602 aa20.52■□□□□ 0.88
LSM4-201ENST00000252816 NUDT7P0C024 238 aa20.52■□□□□ 0.88
LSM4-201ENST00000252816 CD8BP10966 210 aa20.52■□□□□ 0.88
LSM4-201ENST00000252816 EPXP11678 715 aa20.52■□□□□ 0.88
LSM4-201ENST00000252816 MERTKQ12866 999 aa20.52■□□□□ 0.88
LSM4-201ENST00000252816 RGNQ15493 299 aa20.52■□□□□ 0.88
LSM4-201ENST00000252816 LRIF1Q5T3J3 769 aa20.52■□□□□ 0.88
LSM4-201ENST00000252816 CMIPQ8IY22 773 aa20.52■□□□□ 0.88
LSM4-201ENST00000252816 ARFGAP2Q8N6H7 521 aa20.52■□□□□ 0.88
LSM4-201ENST00000252816 ZNF610Q8N9Z0 462 aa20.52■□□□□ 0.88
LSM4-201ENST00000252816 WDR60Q8WVS4 1066 aa20.52■□□□□ 0.88
LSM4-201ENST00000252816 GPATCH1Q9BRR8 931 aaKnown RBP20.52■□□□□ 0.88
LSM4-201ENST00000252816 DNAJB12Q9NXW2 375 aaKnown RBP20.52■□□□□ 0.88
LSM4-201ENST00000252816 AKAP9Q99996 3911 aa20.52■□□□□ 0.87
LSM4-201ENST00000252816 DSPPQ9NZW4 1301 aa20.52■□□□□ 0.87
LSM4-201ENST00000252816 ANKRD17O75179 2603 aaKnown RBP20.51■□□□□ 0.87
LSM4-201ENST00000252816 A6NNC1 897 aa20.51■□□□□ 0.87
LSM4-201ENST00000252816 AP3D1O14617 1153 aa20.51■□□□□ 0.87
LSM4-201ENST00000252816 PLGP00747 810 aaPredicted RBP20.51■□□□□ 0.87
LSM4-201ENST00000252816 DBIP07108 87 aaKnown RBP20.51■□□□□ 0.87
LSM4-201ENST00000252816 DAZAP2Q15038 168 aaPredicted RBP20.51■□□□□ 0.87
LSM4-201ENST00000252816 RPS26P11Q5JNZ5 115 aaPredicted RBP20.51■□□□□ 0.87
LSM4-201ENST00000252816 MRPL2Q5T653 305 aaKnown RBP20.51■□□□□ 0.87
LSM4-201ENST00000252816 C3orf33Q6P1S2 294 aa20.51■□□□□ 0.87
LSM4-201ENST00000252816 LSRQ86X29 649 aaPredicted RBP20.51■□□□□ 0.87
LSM4-201ENST00000252816 LURAP1LQ8IV03 231 aa20.51■□□□□ 0.87
LSM4-201ENST00000252816 ZNF563Q8TA94 476 aa20.51■□□□□ 0.87
LSM4-201ENST00000252816 RNF128Q8TEB7 428 aa20.51■□□□□ 0.87
LSM4-201ENST00000252816 ABHD3Q8WU67 409 aa20.51■□□□□ 0.87
LSM4-201ENST00000252816 PMM1Q92871 262 aa20.51■□□□□ 0.87
LSM4-201ENST00000252816 CPNE4Q96A23 557 aaPredicted RBP20.51■□□□□ 0.87
LSM4-201ENST00000252816 CCDC106Q9BWC9 280 aa20.51■□□□□ 0.87
LSM4-201ENST00000252816 ZNF385DQ9H6B1 395 aa20.51■□□□□ 0.87
LSM4-201ENST00000252816 TIGARQ9NQ88 270 aa20.51■□□□□ 0.87
LSM4-201ENST00000252816 TMEM45AQ9NWC5 275 aa20.51■□□□□ 0.87
LSM4-201ENST00000252816 PROCRQ9UNN8 238 aa20.51■□□□□ 0.87
LSM4-201ENST00000252816 EMC9Q9Y3B6 208 aa20.51■□□□□ 0.87
LSM4-201ENST00000252816 IL7RP16871 459 aa20.5■□□□□ 0.87
LSM4-201ENST00000252816 NCF2P19878 526 aaPredicted RBP20.5■□□□□ 0.87
LSM4-201ENST00000252816 SLC7A1P30825 629 aa20.5■□□□□ 0.87
LSM4-201ENST00000252816 CD79BP40259 229 aa20.5■□□□□ 0.87
LSM4-201ENST00000252816 CRISP3P54108 245 aa20.5■□□□□ 0.87
LSM4-201ENST00000252816 CTBP2P56545 445 aa20.5■□□□□ 0.87
LSM4-201ENST00000252816 IRX1P78414 480 aaPredicted RBP20.5■□□□□ 0.87
LSM4-201ENST00000252816 CDH24Q86UP0 819 aa20.5■□□□□ 0.87
LSM4-201ENST00000252816 VRK2Q86Y07 508 aa20.5■□□□□ 0.87
LSM4-201ENST00000252816 PEX5LQ8IYB4 626 aa20.5■□□□□ 0.87
LSM4-201ENST00000252816 OR6K3Q8NGY3 331 aa20.5■□□□□ 0.87
LSM4-201ENST00000252816 OR52P1PQ8NH57 321 aa20.5■□□□□ 0.87
LSM4-201ENST00000252816 NRGNQ92686 78 aa20.5■□□□□ 0.87
LSM4-201ENST00000252816 MAL2Q969L2 176 aa20.5■□□□□ 0.87
LSM4-201ENST00000252816 TMEM19Q96HH6 336 aa20.5■□□□□ 0.87
LSM4-201ENST00000252816 CTPS2Q9NRF8 586 aa20.5■□□□□ 0.87
LSM4-201ENST00000252816 PLSCR4Q9NRQ2 329 aa20.5■□□□□ 0.87
LSM4-201ENST00000252816 GLRX2Q9NS18 164 aa20.5■□□□□ 0.87
LSM4-201ENST00000252816 RASSF1Q9NS23 344 aa20.5■□□□□ 0.87
LSM4-201ENST00000252816 RLIMQ9NVW2 624 aa20.5■□□□□ 0.87
LSM4-201ENST00000252816 CALML5Q9NZT1 146 aa20.5■□□□□ 0.87
LSM4-201ENST00000252816 VAPAQ9P0L0 249 aa20.5■□□□□ 0.87
LSM4-201ENST00000252816 TRBV5-3A0A0A0MS03 114 aa20.49■□□□□ 0.87
LSM4-201ENST00000252816 A0A0G2JND7 137 aa20.49■□□□□ 0.87
LSM4-201ENST00000252816 BMP2P12643 396 aa20.49■□□□□ 0.87
LSM4-201ENST00000252816 KLK2P20151 261 aa20.49■□□□□ 0.87
LSM4-201ENST00000252816 ENPP1P22413 925 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms