RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 MCTS1Q9ULC4 181 aaKnown RBP22.52■■□□□ 1.2
LSM7-201ENST00000252622 PKDREJQ9NTG1 2253 aa22.52■■□□□ 1.2
LSM7-201ENST00000252622 TNFSF11O14788 317 aa22.51■■□□□ 1.19
LSM7-201ENST00000252622 CXCL13O43927 109 aa22.51■■□□□ 1.19
LSM7-201ENST00000252622 TNFSF13O75888 250 aa22.51■■□□□ 1.19
LSM7-201ENST00000252622 OPN1LWP04000 364 aa22.51■■□□□ 1.19
LSM7-201ENST00000252622 PRF1P14222 555 aa22.51■■□□□ 1.19
LSM7-201ENST00000252622 SHC1P29353 583 aa22.51■■□□□ 1.19
LSM7-201ENST00000252622 SFTPDP35247 375 aa22.51■■□□□ 1.19
LSM7-201ENST00000252622 MRPL2Q5T653 305 aaKnown RBP22.51■■□□□ 1.19
LSM7-201ENST00000252622 HBMQ6B0K9 141 aa22.51■■□□□ 1.19
LSM7-201ENST00000252622 GDF7Q7Z4P5 450 aa22.51■■□□□ 1.19
LSM7-201ENST00000252622 DHDDSQ86SQ9 333 aa22.51■■□□□ 1.19
LSM7-201ENST00000252622 OR52P1PQ8NH57 321 aa22.51■■□□□ 1.19
LSM7-201ENST00000252622 ZNF317Q96PQ6 595 aaPredicted RBP22.51■■□□□ 1.19
LSM7-201ENST00000252622 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.51■■□□□ 1.19
LSM7-201ENST00000252622 PACSIN3Q9UKS6 424 aa22.51■■□□□ 1.19
LSM7-201ENST00000252622 HEATR5AQ86XA9 2040 aa22.51■■□□□ 1.19
LSM7-201ENST00000252622 INTS1Q8N201 2190 aaKnown RBP22.5■■□□□ 1.19
LSM7-201ENST00000252622 MAST4O15021 2626 aa22.5■■□□□ 1.19
LSM7-201ENST00000252622 EEF1E1-BLOC1S5C9J1V9 151 aa22.5■■□□□ 1.19
LSM7-201ENST00000252622 EEF1E1O43324 174 aaKnown RBP22.5■■□□□ 1.19
LSM7-201ENST00000252622 SYNGR4O95473 234 aa22.5■■□□□ 1.19
LSM7-201ENST00000252622 THBS1P07996 1170 aa22.5■■□□□ 1.19
LSM7-201ENST00000252622 ARAFP10398 606 aa22.5■■□□□ 1.19
LSM7-201ENST00000252622 GPX2P18283 190 aa22.5■■□□□ 1.19
LSM7-201ENST00000252622 PEX19P40855 299 aa22.5■■□□□ 1.19
LSM7-201ENST00000252622 ZSWIM7Q19AV6 140 aa22.5■■□□□ 1.19
LSM7-201ENST00000252622 RPS26P11Q5JNZ5 115 aaPredicted RBP22.5■■□□□ 1.19
LSM7-201ENST00000252622 GCNT6Q5T4J0 391 aa22.5■■□□□ 1.19
LSM7-201ENST00000252622 RNF220Q5VTB9 566 aa22.5■■□□□ 1.19
LSM7-201ENST00000252622 C3orf33Q6P1S2 294 aa22.5■■□□□ 1.19
LSM7-201ENST00000252622 PLEKHM3Q6ZWE6 761 aa22.5■■□□□ 1.19
LSM7-201ENST00000252622 RETREG3Q86VR2 466 aa22.5■■□□□ 1.19
LSM7-201ENST00000252622 MED12LQ86YW9 2145 aa22.5■■□□□ 1.19
LSM7-201ENST00000252622 ZNF563Q8TA94 476 aa22.5■■□□□ 1.19
LSM7-201ENST00000252622 BBS10Q8TAM1 723 aa22.5■■□□□ 1.19
LSM7-201ENST00000252622 MAL2Q969L2 176 aa22.5■■□□□ 1.19
LSM7-201ENST00000252622 CPPED1Q9BRF8 314 aaPredicted RBP22.5■■□□□ 1.19
LSM7-201ENST00000252622 IKZF5Q9H5V7 419 aa22.5■■□□□ 1.19
LSM7-201ENST00000252622 CDHR4A6H8M9 788 aa22.49■■□□□ 1.19
LSM7-201ENST00000252622 EVPLLA8MZ36 301 aa22.49■■□□□ 1.19
LSM7-201ENST00000252622 FAAHO00519 579 aa22.49■■□□□ 1.19
LSM7-201ENST00000252622 ADAM11O75078 769 aa22.49■■□□□ 1.19
LSM7-201ENST00000252622 AQP8O94778 261 aa22.49■■□□□ 1.19
LSM7-201ENST00000252622 UQCRC1P31930 480 aa22.49■■□□□ 1.19
LSM7-201ENST00000252622 RYKP34925 604 aa22.49■■□□□ 1.19
LSM7-201ENST00000252622 MERTKQ12866 999 aa22.49■■□□□ 1.19
LSM7-201ENST00000252622 GUSBP1Q15486 140 aa22.49■■□□□ 1.19
LSM7-201ENST00000252622 TMEM176BQ3YBM2 270 aaPredicted RBP22.49■■□□□ 1.19
LSM7-201ENST00000252622 RUNDC3AQ59EK9 446 aa22.49■■□□□ 1.19
LSM7-201ENST00000252622 ZNF836Q6ZNA1 936 aa22.49■■□□□ 1.19
LSM7-201ENST00000252622 ZNF440Q8IYI8 595 aa22.49■■□□□ 1.19
LSM7-201ENST00000252622 ZNF295-AS1Q8N0V1 137 aa22.49■■□□□ 1.19
LSM7-201ENST00000252622 C10orf111Q8N326 155 aa22.49■■□□□ 1.19
LSM7-201ENST00000252622 OSTF1Q92882 214 aa22.49■■□□□ 1.19
LSM7-201ENST00000252622 C14orf79Q96F83 325 aa22.49■■□□□ 1.19
LSM7-201ENST00000252622 PRRG4Q9BZD6 226 aa22.49■■□□□ 1.19
LSM7-201ENST00000252622 COQ10BQ9H8M1 238 aa22.49■■□□□ 1.19
LSM7-201ENST00000252622 CACYBPQ9HB71 228 aaKnown RBP22.49■■□□□ 1.19
LSM7-201ENST00000252622 TIGARQ9NQ88 270 aa22.49■■□□□ 1.19
LSM7-201ENST00000252622 SERINC1Q9NRX5 453 aa22.49■■□□□ 1.19
LSM7-201ENST00000252622 ZNF443Q9Y2A4 671 aaPredicted RBP22.49■■□□□ 1.19
LSM7-201ENST00000252622 C5orf58C9J3I9 102 aa22.48■■□□□ 1.19
LSM7-201ENST00000252622 APOBEC1P41238 236 aaKnown RBP22.48■■□□□ 1.19
LSM7-201ENST00000252622 CARD18P57730 90 aa22.48■■□□□ 1.19
LSM7-201ENST00000252622 LARS2Q15031 903 aaKnown RBP22.48■■□□□ 1.19
LSM7-201ENST00000252622 GRINAQ7Z429 371 aa22.48■■□□□ 1.19
LSM7-201ENST00000252622 VRK2Q86Y07 508 aa22.48■■□□□ 1.19
LSM7-201ENST00000252622 SLC25A43Q8WUT9 341 aaPredicted RBP22.48■■□□□ 1.19
LSM7-201ENST00000252622 CPNE4Q96A23 557 aaPredicted RBP22.48■■□□□ 1.19
LSM7-201ENST00000252622 CGREF1Q99674 301 aa22.48■■□□□ 1.19
LSM7-201ENST00000252622 CCDC106Q9BWC9 280 aa22.48■■□□□ 1.19
LSM7-201ENST00000252622 TMEM38AQ9H6F2 299 aa22.48■■□□□ 1.19
LSM7-201ENST00000252622 SAR1AQ9NR31 198 aa22.48■■□□□ 1.19
LSM7-201ENST00000252622 PRDM4Q9UKN5 801 aa22.48■■□□□ 1.19
LSM7-201ENST00000252622 IFT52Q9Y366 437 aa22.48■■□□□ 1.19
LSM7-201ENST00000252622 NAV2Q8IVL1 2488 aa22.47■■□□□ 1.19
LSM7-201ENST00000252622 CFAP73A6NFT4 308 aa22.47■■□□□ 1.19
LSM7-201ENST00000252622 AP3D1O14617 1153 aa22.47■■□□□ 1.19
LSM7-201ENST00000252622 PGM3O95394 542 aa22.47■■□□□ 1.19
LSM7-201ENST00000252622 UQCRBP14927 111 aa22.47■■□□□ 1.19
LSM7-201ENST00000252622 SLC7A1P30825 629 aa22.47■■□□□ 1.19
LSM7-201ENST00000252622 SSTR2P30874 369 aa22.47■■□□□ 1.19
LSM7-201ENST00000252622 KIR2DL2P43627 348 aaPredicted RBP22.47■■□□□ 1.19
LSM7-201ENST00000252622 SF3A3Q12874 501 aaKnown RBP eCLIP22.47■■□□□ 1.192e-6■■■□□ 15.8
LSM7-201ENST00000252622 EPS8Q12929 822 aa22.47■■□□□ 1.19
LSM7-201ENST00000252622 ZNF239Q16600 458 aaKnown RBP22.47■■□□□ 1.19
LSM7-201ENST00000252622 PPP4R4Q6NUP7 873 aa22.47■■□□□ 1.19
LSM7-201ENST00000252622 CNEP1R1Q8N9A8 125 aa22.47■■□□□ 1.19
LSM7-201ENST00000252622 C10orf82Q8WW14 230 aa22.47■■□□□ 1.19
LSM7-201ENST00000252622 STARD4Q96DR4 205 aa22.47■■□□□ 1.19
LSM7-201ENST00000252622 ANKRD27Q96NW4 1050 aa22.47■■□□□ 1.19
LSM7-201ENST00000252622 SPATA9Q9BWV2 254 aa22.47■■□□□ 1.19
LSM7-201ENST00000252622 KCNN3Q9UGI6 736 aa22.47■■□□□ 1.19
LSM7-201ENST00000252622 SPIN1Q9Y657 262 aaPredicted RBP22.47■■□□□ 1.19
LSM7-201ENST00000252622 ITPR2Q14571 2701 aa22.46■■□□□ 1.19
LSM7-201ENST00000252622 MSTNO14793 375 aa22.46■■□□□ 1.19
LSM7-201ENST00000252622 ETS2P15036 469 aa22.46■■□□□ 1.19
LSM7-201ENST00000252622 ADSLP30566 484 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms