RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 PEPDP12955 493 aa20.63■□□□□ 0.89
APOE-201ENST00000252486 PRG2P13727 222 aa20.63■□□□□ 0.89
APOE-201ENST00000252486 ABOP16442 354 aa20.63■□□□□ 0.89
APOE-201ENST00000252486 BMP7P18075 431 aa20.63■□□□□ 0.89
APOE-201ENST00000252486 TCEA1P23193 301 aaKnown RBP20.63■□□□□ 0.89
APOE-201ENST00000252486 FKBP2P26885 142 aaKnown RBP20.63■□□□□ 0.89
APOE-201ENST00000252486 APOBEC1P41238 236 aaKnown RBP20.63■□□□□ 0.89
APOE-201ENST00000252486 FOXK1P85037 733 aa20.63■□□□□ 0.89
APOE-201ENST00000252486 HSF1Q00613 529 aa20.63■□□□□ 0.89
APOE-201ENST00000252486 WLSQ5T9L3 541 aa20.63■□□□□ 0.89
APOE-201ENST00000252486 ZNF605Q86T29 641 aa20.63■□□□□ 0.89
APOE-201ENST00000252486 COMTD1Q86VU5 262 aa20.63■□□□□ 0.89
APOE-201ENST00000252486 DHFR2Q86XF0 187 aa20.63■□□□□ 0.89
APOE-201ENST00000252486 PM20D2Q8IYS1 436 aa20.63■□□□□ 0.89
APOE-201ENST00000252486 LSMEM1Q8N8F7 131 aa20.63■□□□□ 0.89
APOE-201ENST00000252486 CLPTM1LQ96KA5 538 aa20.63■□□□□ 0.89
APOE-201ENST00000252486 UGT2B28Q9BY64 529 aa20.63■□□□□ 0.89
APOE-201ENST00000252486 CADM1Q9BY67 442 aaKnown RBP20.63■□□□□ 0.89
APOE-201ENST00000252486 TMEM27Q9HBJ8 222 aa20.63■□□□□ 0.89
APOE-201ENST00000252486 SERINC1Q9NRX5 453 aa20.63■□□□□ 0.89
APOE-201ENST00000252486 SPRR3Q9UBC9 169 aa20.63■□□□□ 0.89
APOE-201ENST00000252486 RPS6KB2Q9UBS0 482 aa20.63■□□□□ 0.89
APOE-201ENST00000252486 SH3GLB1Q9Y371 365 aa20.63■□□□□ 0.89
APOE-201ENST00000252486 KALRNO60229 2985 aa20.63■□□□□ 0.89
APOE-201ENST00000252486 HEATR5AQ86XA9 2040 aa20.63■□□□□ 0.89
APOE-201ENST00000252486 SHANK1Q9Y566 2161 aa20.62■□□□□ 0.89
APOE-201ENST00000252486 M0R3H8 397 aa20.62■□□□□ 0.89
APOE-201ENST00000252486 POU3F2P20265 443 aaPredicted RBP20.62■□□□□ 0.89
APOE-201ENST00000252486 PSMA4P25789 261 aaKnown RBP20.62■□□□□ 0.89
APOE-201ENST00000252486 POLR2HP52434 150 aaKnown RBP20.62■□□□□ 0.89
APOE-201ENST00000252486 MAP2K6P52564 334 aa20.62■□□□□ 0.89
APOE-201ENST00000252486 RAC1P63000 192 aa20.62■□□□□ 0.89
APOE-201ENST00000252486 KCNC4Q03721 635 aa20.62■□□□□ 0.89
APOE-201ENST00000252486 CRYZQ08257 329 aaKnown RBP20.62■□□□□ 0.89
APOE-201ENST00000252486 MERTKQ12866 999 aa20.62■□□□□ 0.89
APOE-201ENST00000252486 SELENBP1Q13228 472 aa20.62■□□□□ 0.89
APOE-201ENST00000252486 IFI44LQ53G44 452 aa20.62■□□□□ 0.89
APOE-201ENST00000252486 PLEKHM3Q6ZWE6 761 aa20.62■□□□□ 0.89
APOE-201ENST00000252486 FKBP9P1Q75LS8 142 aa20.62■□□□□ 0.89
APOE-201ENST00000252486 YTHDF3Q7Z739 585 aaKnown RBP20.62■□□□□ 0.89
APOE-201ENST00000252486 CARM1Q86X55 608 aa20.62■□□□□ 0.89
APOE-201ENST00000252486 CHERPQ8IWX8 916 aaKnown RBP20.62■□□□□ 0.89
APOE-201ENST00000252486 ULK2Q8IYT8 1036 aa20.62■□□□□ 0.89
APOE-201ENST00000252486 POC1BQ8TC44 478 aa20.62■□□□□ 0.89
APOE-201ENST00000252486 GEMIN6Q8WXD5 167 aaKnown RBP20.62■□□□□ 0.89
APOE-201ENST00000252486 TRIM15Q9C019 465 aa20.62■□□□□ 0.89
APOE-201ENST00000252486 ACAD8Q9UKU7 415 aa20.62■□□□□ 0.89
APOE-201ENST00000252486 ZNF835Q9Y2P0 537 aa20.62■□□□□ 0.89
APOE-201ENST00000252486 SPIN1Q9Y657 262 aaPredicted RBP20.62■□□□□ 0.89
APOE-201ENST00000252486 GJE1A6NN92 205 aa20.61■□□□□ 0.89
APOE-201ENST00000252486 TMEM229AB2RXF0 380 aa20.61■□□□□ 0.89
APOE-201ENST00000252486 NPIPA2E9PIF3 369 aa20.61■□□□□ 0.89
APOE-201ENST00000252486 NPIPA3F8WFD2 350 aa20.61■□□□□ 0.89
APOE-201ENST00000252486 PRRG2O14669 202 aa20.61■□□□□ 0.89
APOE-201ENST00000252486 FREM3P0C091 2139 aa20.61■□□□□ 0.89
APOE-201ENST00000252486 CPN1P15169 458 aa20.61■□□□□ 0.89
APOE-201ENST00000252486 LCN8Q6JVE9 175 aa20.61■□□□□ 0.89
APOE-201ENST00000252486 Q6ZPB1 254 aaPredicted RBP20.61■□□□□ 0.89
APOE-201ENST00000252486 FGD2Q7Z6J4 655 aa20.61■□□□□ 0.89
APOE-201ENST00000252486 CADM2Q8N3J6 435 aa20.61■□□□□ 0.89
APOE-201ENST00000252486 OR6T1Q8NGN1 323 aa20.61■□□□□ 0.89
APOE-201ENST00000252486 OR5M1Q8NGP8 315 aa20.61■□□□□ 0.89
APOE-201ENST00000252486 FAM57AQ8TBR7 257 aa20.61■□□□□ 0.89
APOE-201ENST00000252486 CCDC124Q96CT7 223 aaKnown RBP20.61■□□□□ 0.89
APOE-201ENST00000252486 MCHR1Q99705 422 aa20.61■□□□□ 0.89
APOE-201ENST00000252486 TIMP4Q99727 224 aa20.61■□□□□ 0.89
APOE-201ENST00000252486 POLR2J2Q9GZM3 115 aaKnown RBP20.61■□□□□ 0.89
APOE-201ENST00000252486 ADAM19Q9H013 955 aa20.61■□□□□ 0.89
APOE-201ENST00000252486 POLR2J3Q9H1A7 115 aaKnown RBP20.61■□□□□ 0.89
APOE-201ENST00000252486 C12orf10Q9HB07 376 aa20.61■□□□□ 0.89
APOE-201ENST00000252486 SELENONQ9NZV5 590 aa20.61■□□□□ 0.89
APOE-201ENST00000252486 ZNF337Q9Y3M9 751 aa20.61■□□□□ 0.89
APOE-201ENST00000252486 SHISA8B8ZZ34 492 aa20.6■□□□□ 0.89
APOE-201ENST00000252486 SLC19A2O60779 497 aa20.6■□□□□ 0.89
APOE-201ENST00000252486 LHX2P50458 406 aa20.6■□□□□ 0.89
APOE-201ENST00000252486 CASP6P55212 293 aa20.6■□□□□ 0.89
APOE-201ENST00000252486 SF3B4Q15427 424 aaKnown RBP eCLIP20.6■□□□□ 0.897e-8■■■■■ 35
APOE-201ENST00000252486 C3orf33Q6P1S2 294 aa20.6■□□□□ 0.89
APOE-201ENST00000252486 ASRGL1Q7L266 308 aa20.6■□□□□ 0.89
APOE-201ENST00000252486 VANGL1Q8TAA9 524 aaPredicted RBP20.6■□□□□ 0.89
APOE-201ENST00000252486 SLC25A43Q8WUT9 341 aaPredicted RBP20.6■□□□□ 0.89
APOE-201ENST00000252486 DNAJA4Q8WW22 397 aaPredicted RBP20.6■□□□□ 0.89
APOE-201ENST00000252486 HSH2DQ96JZ2 352 aa20.6■□□□□ 0.89
APOE-201ENST00000252486 LRGUKQ96M69 825 aa20.6■□□□□ 0.89
APOE-201ENST00000252486 PRDM14Q9GZV8 571 aa20.6■□□□□ 0.89
APOE-201ENST00000252486 H3BML4 177 aa20.59■□□□□ 0.89
APOE-201ENST00000252486 IFNW1P05000 195 aa20.59■□□□□ 0.89
APOE-201ENST00000252486 TPOP07202 933 aa20.59■□□□□ 0.89
APOE-201ENST00000252486 HOXD4P09016 255 aaPredicted RBP20.59■□□□□ 0.89
APOE-201ENST00000252486 TACR3P29371 465 aa20.59■□□□□ 0.89
APOE-201ENST00000252486 IFNA8P32881 189 aa20.59■□□□□ 0.89
APOE-201ENST00000252486 HOXC5Q00444 222 aa20.59■□□□□ 0.89
APOE-201ENST00000252486 SWT1Q5T5J6 900 aaKnown RBP20.59■□□□□ 0.89
APOE-201ENST00000252486 ZNF613Q6PF04 617 aa20.59■□□□□ 0.89
APOE-201ENST00000252486 VTCN1Q7Z7D3 282 aa20.59■□□□□ 0.89
APOE-201ENST00000252486 MEIOBQ8N635 442 aa20.59■□□□□ 0.89
APOE-201ENST00000252486 ZNF524Q96C55 264 aa20.59■□□□□ 0.89
APOE-201ENST00000252486 PYURFQ96I23 114 aa20.59■□□□□ 0.89
APOE-201ENST00000252486 NPAS1Q99742 590 aa20.59■□□□□ 0.89
APOE-201ENST00000252486 CHRNA9Q9UGM1 479 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms