RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 NCKAP1Q9Y2A7 1128 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 ZNF780BQ9Y6R6 833 aa9.37□□□□□ -0.91
COPB1-201ENST00000249923 REM1O75628 298 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 ADH1BP00325 375 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 CD3GP09693 182 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 PAICSP22234 425 aaKnown RBP9.36□□□□□ -0.91
COPB1-201ENST00000249923 BTCP35070 178 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 PPP3R1P63098 170 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 MGAT2Q10469 447 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 RIN1Q13671 783 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 YIF1BQ5BJH7 314 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 SFRP4Q6FHJ7 346 aaPredicted RBP9.36□□□□□ -0.91
COPB1-201ENST00000249923 RAB42Q8N4Z0 105 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 OR13C2Q8NGS9 318 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 BRIX1Q8TDN6 353 aaKnown RBP9.36□□□□□ -0.91
COPB1-201ENST00000249923 TSACCQ96A04 125 aaPredicted RBP9.36□□□□□ -0.91
COPB1-201ENST00000249923 ZC3HAV1LQ96H79 300 aaKnown RBP9.36□□□□□ -0.91
COPB1-201ENST00000249923 PEX11GQ96HA9 241 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 MYADMQ96S97 322 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 IL21RQ9HBE5 538 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 ENAMQ9NRM1 1142 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 EPOPA6NHQ4 379 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 MAGEB4O15481 346 aaPredicted RBP9.36□□□□□ -0.91
COPB1-201ENST00000249923 LINC01565O15544 149 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 EIF4EP06730 217 aaKnown RBP9.36□□□□□ -0.91
COPB1-201ENST00000249923 TRAPPC2P0DI81 140 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 TRAPPC2BP0DI82 140 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 SLC2A5P22732 501 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 ERP29P30040 261 aaKnown RBP9.36□□□□□ -0.91
COPB1-201ENST00000249923 CMPK1P30085 196 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 MAP3K8P41279 467 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 PPP1CAP62136 330 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 EXOSC7Q15024 291 aaKnown RBP9.36□□□□□ -0.91
COPB1-201ENST00000249923 FCN2Q15485 313 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 SYT9Q86SS6 491 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 ASPGQ86U10 573 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 KLHL36Q8N4N3 616 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 GALNT11Q8NCW6 608 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 DUSP18Q8NEJ0 188 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 OR13C5Q8NGS8 318 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 COQ8AQ8NI60 647 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 NT5CQ8TCD5 201 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 LCN9Q8WX39 176 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 TMEM168Q9H0V1 697 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 RBFOX1Q9NWB1 397 aaKnown RBP9.36□□□□□ -0.91
COPB1-201ENST00000249923 TRAV27A0A087WT01 109 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 GXYLT2A0PJZ3 443 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 CDHR4A6H8M9 788 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 AKAP8O43823 692 aaKnown RBP9.36□□□□□ -0.91
COPB1-201ENST00000249923 SC5DO75845 299 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 PVRP15151 417 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 SHC1P29353 583 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 ACVR1BP36896 505 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 C11orf88Q6PI97 169 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 OR10H4Q8NGA5 316 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 PGLYRP3Q96LB9 341 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 ALG8Q9BVK2 526 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 MTHFD2LQ9H903 347 aaPredicted RBP9.36□□□□□ -0.91
COPB1-201ENST00000249923 MED17Q9NVC6 651 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 GDE1Q9NZC3 331 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 OR6C2Q9NZP2 312 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 TNFRSF10DQ9UBN6 386 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 SLC22A7Q9Y694 548 aa9.36□□□□□ -0.91
COPB1-201ENST00000249923 IMPA2O14732 288 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 ZNF780AO75290 641 aaPredicted RBP9.35□□□□□ -0.91
COPB1-201ENST00000249923 DHFRP00374 187 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 GYPBP06028 91 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 CPMP14384 443 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 NDUFS1P28331 727 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 IFNGR2P38484 337 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 HCCSP53701 268 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 ZNF85Q03923 595 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 SGCGQ13326 291 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 OR1Q1Q15612 314 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 LAMTOR1Q6IAA8 161 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 FIGNL1Q6PIW4 674 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 ZC3H14Q6PJT7 736 aaKnown RBP9.35□□□□□ -0.91
COPB1-201ENST00000249923 ESPNLQ6ZVH7 1005 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 FRMD1Q8N878 549 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 FANK1Q8TC84 345 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 ZNRF4Q8WWF5 429 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 RFKQ969G6 155 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 DNAJA3Q96EY1 480 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 RBCK1Q9BYM8 510 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 LYARQ9NX58 379 aaKnown RBP9.35□□□□□ -0.91
COPB1-201ENST00000249923 FLRT3Q9NZU0 649 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 POLHQ9Y253 713 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 SIGLEC7Q9Y286 467 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 HLA-DPB1P04440 258 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 FNTBP49356 437 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 ANXA11P50995 505 aaKnown RBP9.35□□□□□ -0.91
COPB1-201ENST00000249923 GPM6BQ13491 265 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 FAM53BQ14153 422 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 SLC25A35Q3KQZ1 300 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 DCST2Q5T1A1 773 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 PRPF38BQ5VTL8 546 aaKnown RBP9.35□□□□□ -0.91
COPB1-201ENST00000249923 RD3Q7Z3Z2 195 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 LNX2Q8N448 690 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 CYB561A3Q8NBI2 242 aa9.35□□□□□ -0.91
COPB1-201ENST00000249923 OR4M1Q8NGD0 313 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms