RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 ALG10BQ5I7T1 473 aa11.79□□□□□ -0.52
LSM8-201ENST00000249299 ZNF468Q5VIY5 522 aaPredicted RBP11.79□□□□□ -0.52
LSM8-201ENST00000249299 TIGD3Q6B0B8 471 aa11.79□□□□□ -0.52
LSM8-201ENST00000249299 ZNF770Q6IQ21 691 aaPredicted RBP11.79□□□□□ -0.52
LSM8-201ENST00000249299 FAHD1Q6P587 224 aa11.79□□□□□ -0.52
LSM8-201ENST00000249299 IGFL3Q6UXB1 125 aa11.79□□□□□ -0.52
LSM8-201ENST00000249299 CD300LDQ6UXZ3 194 aa11.79□□□□□ -0.52
LSM8-201ENST00000249299 RRM2BQ7LG56 351 aa11.79□□□□□ -0.52
LSM8-201ENST00000249299 GRINAQ7Z429 371 aa11.79□□□□□ -0.52
LSM8-201ENST00000249299 STK32CQ86UX6 486 aa11.79□□□□□ -0.52
LSM8-201ENST00000249299 CBR4Q8N4T8 237 aa11.79□□□□□ -0.52
LSM8-201ENST00000249299 FAM173AQ9BQD7 235 aa11.79□□□□□ -0.52
LSM8-201ENST00000249299 COQ10BQ9H8M1 238 aa11.79□□□□□ -0.52
LSM8-201ENST00000249299 VNN3Q9NY84 501 aa11.79□□□□□ -0.52
LSM8-201ENST00000249299 PDP1Q9P0J1 537 aaPredicted RBP11.79□□□□□ -0.52
LSM8-201ENST00000249299 KLF13Q9Y2Y9 288 aaPredicted RBP11.79□□□□□ -0.52
LSM8-201ENST00000249299 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 TRBV4-1A0A0J9YWV2 114 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 SAC3D1A6NKF1 404 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 FAM47E-STBD1D6RA91 191 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 RNF223E7ERA6 249 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 LYPD3O95274 346 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 WDPCPO95876 746 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 CCL3P10147 92 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 GP1BBP13224 206 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 CDH2P19022 906 aaPredicted RBP11.78□□□□□ -0.52
LSM8-201ENST00000249299 ITPKBP27987 946 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 APOBEC1P41238 236 aaKnown RBP11.78□□□□□ -0.52
LSM8-201ENST00000249299 IDH2P48735 452 aaKnown RBP11.78□□□□□ -0.52
LSM8-201ENST00000249299 CCL11P51671 97 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 RAD23AP54725 363 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 TMPRSS3P57727 454 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 HOXC5Q00444 222 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 OR1C1Q15619 314 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 EXOC3L2Q2M3D2 409 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 FGD3Q5JSP0 725 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 FREM2Q5SZK8 3169 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 LPCAT4Q643R3 524 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 KDM4DQ6B0I6 523 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 MBOAT2Q6ZWT7 520 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 TSPYL5Q86VY4 417 aaPredicted RBP11.78□□□□□ -0.52
LSM8-201ENST00000249299 ZNF227Q86WZ6 799 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 PARP8Q8N3A8 854 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 TMCO5AQ8N6Q1 288 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 GATSQ8NAP1 163 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 MDS2Q8NDY4 140 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 OR2M3Q8NG83 312 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 OR10G2Q8NGC3 310 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 ZNF563Q8TA94 476 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 PRR7Q8TB68 274 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 ZBTB8AQ96BR9 441 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 C3orf49Q96BT1 292 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 MRGPRX4Q96LA9 322 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 ZNF597Q96LX8 424 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 TMEM43Q9BTV4 400 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 DGCR6LQ9BY27 220 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 ZNF556Q9HAH1 456 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 PROK2Q9HC23 129 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 GALNT9Q9HCQ5 603 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 TAS2R10Q9NYW0 307 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 SLC7A7Q9UM01 511 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 BOKQ9UMX3 212 aaPredicted RBP11.78□□□□□ -0.52
LSM8-201ENST00000249299 TMEM5Q9Y2B1 443 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 ORC6Q9Y5N6 252 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 U3KQV3 271 aa11.78□□□□□ -0.52
LSM8-201ENST00000249299 A0A087WUU8 490 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 SOCS2O14508 198 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 EI24O14681 340 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 OIP5O43482 229 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 SLC25A12O75746 678 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 THY1P04216 161 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 ITGB2P05107 769 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 GSTM3P21266 225 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 RYKP34925 604 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 MMP16P51512 607 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 CCR4P51679 360 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 ZNF41P51814 821 aaPredicted RBP11.77□□□□□ -0.53
LSM8-201ENST00000249299 POLR2HP52434 150 aaKnown RBP11.77□□□□□ -0.53
LSM8-201ENST00000249299 IST1P53990 364 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 DSCR4P56555 118 aaPredicted RBP11.77□□□□□ -0.53
LSM8-201ENST00000249299 HYAL4Q2M3T9 481 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 OTUD3Q5T2D3 398 aaPredicted RBP11.77□□□□□ -0.53
LSM8-201ENST00000249299 SLC25A25Q6KCM7 469 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 C1orf94Q6P1W5 598 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 PODNL1Q6PEZ8 512 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 ZNF730Q6ZMV8 503 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 MDGA2Q7Z553 956 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 TMEM179BQ7Z7N9 219 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 ATG4DQ86TL0 474 aaPredicted RBP11.77□□□□□ -0.53
LSM8-201ENST00000249299 WDSUB1Q8N9V3 476 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 TMEM178AQ8NBL3 297 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 FDCSPQ8NFU4 85 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 OR4K17Q8NGC6 315 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 OR4K5Q8NGD3 323 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 OR1J4Q8NGS1 313 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 OR6S1Q8NH40 331 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 OR52J3Q8NH60 311 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 TMEM239Q8WW34 195 aa11.77□□□□□ -0.53
LSM8-201ENST00000249299 ZNF184Q99676 751 aaPredicted RBP11.77□□□□□ -0.53
LSM8-201ENST00000249299 PRSS27Q9BQR3 290 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms