RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 FHL1Q13642 323 aa16.02■□□□□ 0.15
LRFN3-201ENST00000246529 RSBN1Q5VWQ0 802 aaPredicted RBP16.02■□□□□ 0.15
LRFN3-201ENST00000246529 ARL9Q6T311 187 aa16.02■□□□□ 0.15
LRFN3-201ENST00000246529 RPTNQ6XPR3 784 aa16.02■□□□□ 0.15
LRFN3-201ENST00000246529 RCBTB1Q8NDN9 531 aa16.02■□□□□ 0.15
LRFN3-201ENST00000246529 RBM18Q96H35 190 aaKnown RBP16.02■□□□□ 0.15
LRFN3-201ENST00000246529 HOXD1Q9GZZ0 328 aa16.02■□□□□ 0.15
LRFN3-201ENST00000246529 MCCC2Q9HCC0 563 aa16.02■□□□□ 0.15
LRFN3-201ENST00000246529 CHRNB1P11230 501 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 PPM1FP49593 454 aaPredicted RBP16.01■□□□□ 0.15
LRFN3-201ENST00000246529 CTBP2P56545 445 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 KIRREL2Q6UWL6 708 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 ARL14Q8N4G2 192 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 RFLNBQ8N5W9 214 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 GALNT6Q8NCL4 622 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 OR4C6Q8NH72 309 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 HOXB13Q92826 284 aaPredicted RBP16.01■□□□□ 0.15
LRFN3-201ENST00000246529 VSTM2LQ96N03 204 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 LMF2Q9BU23 707 aaKnown RBP16.01■□□□□ 0.15
LRFN3-201ENST00000246529 ASB6Q9NWX5 421 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 LRIT1Q9P2V4 623 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 TMEM5Q9Y2B1 443 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 CLCA3PQ9Y6N3 262 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 MAGEB4O15481 346 aaPredicted RBP16.01■□□□□ 0.15
LRFN3-201ENST00000246529 PLA2G10O15496 165 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 HCN1O60741 890 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 CCR5P51681 352 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 PPP3R1P63098 170 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 ZNHIT3Q15649 155 aaPredicted RBP16.01■□□□□ 0.15
LRFN3-201ENST00000246529 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.01■□□□□ 0.15
LRFN3-201ENST00000246529 PRTGQ2VWP7 1150 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 PARGQ86W56 976 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 RAB43Q86YS6 212 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 GHDCQ8N2G8 530 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 LRRC17Q8N6Y2 441 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 GDPD1Q8N9F7 314 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 DTX3Q8N9I9 347 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 KLHDC7BQ96G42 594 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 ADGRL4Q9HBW9 690 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 B3GAT2Q9NPZ5 323 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 C14orf105Q9NVL8 296 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 ZMIZ1Q9ULJ6 1067 aa16.01■□□□□ 0.15
LRFN3-201ENST00000246529 RIIAD1A6NNX1 92 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 RGS9O75916 674 aaPredicted RBP16■□□□□ 0.15
LRFN3-201ENST00000246529 SLC3A1Q07837 685 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 ASAH1Q13510 395 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 GALEQ14376 348 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 GXYLT1Q4G148 440 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 SSX6Q7RTT6 188 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 GLCCI1Q86VQ1 547 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 OR51L1Q8NGJ5 315 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 OR5W2Q8NH69 310 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 ORAI3Q9BRQ5 295 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 POLE3Q9NRF9 147 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 WSB2Q9NYS7 404 aaPredicted RBP16■□□□□ 0.15
LRFN3-201ENST00000246529 SLC35A3Q9Y2D2 325 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 J3QLW9 94 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 RNH1P13489 461 aaKnown RBP16■□□□□ 0.15
LRFN3-201ENST00000246529 ZNF19P17023 458 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 ZNF85Q03923 595 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 IL20RBQ6UXL0 311 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 C17orf47Q8NEP4 570 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 OR4C3Q8NH37 302 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 TP53INP1Q96A56 240 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 C4orf36Q96KX1 117 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 NECTIN4Q96NY8 510 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 LMF1Q96S06 567 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 SMAD5Q99717 465 aaKnown RBP16■□□□□ 0.15
LRFN3-201ENST00000246529 SLC22A4Q9H015 551 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 PPP1R3EQ9H7J1 279 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 GPR27Q9NS67 375 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 ERVK-19Q9WJR5 959 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 GRIP1Q9Y3R0 1128 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 TMEM184BQ9Y519 407 aaPredicted RBP16■□□□□ 0.15
LRFN3-201ENST00000246529 CLDN16Q9Y5I7 305 aa16■□□□□ 0.15
LRFN3-201ENST00000246529 A0A1W2PPC4 97 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 SLC22A31A6NKX4 558 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 SBK2P0C263 348 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 SLC2A5P22732 501 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 SHC1P29353 583 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 OR12D2P58182 307 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 IL18Q14116 193 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 IDNKQ5T6J7 187 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 RPL13AP3Q6NVV1 102 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 SDR9C7Q8NEX9 313 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 OR5M3Q8NGP4 307 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 CHAC2Q8WUX2 184 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 COQ7Q99807 217 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 ZNF426Q9BUY5 554 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 PRTFDC1Q9NRG1 225 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 POLHQ9Y253 713 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 MEIOCA2RUB1 952 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 ZNF544Q6NX49 715 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 Q8N402 240 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 OR52E2Q8NGJ4 325 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 OR6F1Q8NGZ6 308 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 OR4K13Q8NH42 304 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 SMPDL3BQ92485 455 aa15.99■□□□□ 0.15
LRFN3-201ENST00000246529 ERMAPQ96PL5 475 aaPredicted RBP15.99■□□□□ 0.15
LRFN3-201ENST00000246529 CCDC86Q9H6F5 360 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms