RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 ZNF225Q9UK10 706 aa12.52□□□□□ -0.4
NEK4-201ENST00000233027 KDM4EB2RXH2 506 aaPredicted RBP12.52□□□□□ -0.41
NEK4-201ENST00000233027 IL1AP01583 271 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 TPT1P13693 172 aaKnown RBP12.52□□□□□ -0.41
NEK4-201ENST00000233027 VRK1Q99986 396 aaPredicted RBP12.52□□□□□ -0.41
NEK4-201ENST00000233027 TUBB1Q9H4B7 451 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 ADAMTS5Q9UNA0 930 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 FTCDNL1E5RQL4 147 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 F13BP05160 661 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 ADARB1P78563 741 aaKnown RBP12.52□□□□□ -0.41
NEK4-201ENST00000233027 SLC22A6Q4U2R8 563 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 PGM2L1Q6PCE3 622 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 TMEM184AQ6ZMB5 413 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 RFLNAQ6ZTI6 216 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 ELP4Q96EB1 424 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 SDSLQ96GA7 329 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 HHIPL1Q96JK4 782 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 CPEB1Q9BZB8 566 aaKnown RBP12.52□□□□□ -0.41
NEK4-201ENST00000233027 ZNF334Q9HCZ1 680 aaPredicted RBP12.52□□□□□ -0.41
NEK4-201ENST00000233027 ZNF337Q9Y3M9 751 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 EGFP01133 1207 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 BMPR1AP36894 532 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 SLC6A8P48029 635 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 SLC6A11P48066 632 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 DUSP3P51452 185 aaPredicted RBP12.52□□□□□ -0.41
NEK4-201ENST00000233027 UBE2NP61088 152 aaKnown RBP12.52□□□□□ -0.41
NEK4-201ENST00000233027 PSPHP78330 225 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 NKX6-1P78426 367 aaPredicted RBP12.52□□□□□ -0.41
NEK4-201ENST00000233027 C18orf63Q68DL7 685 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 ABHD12BQ7Z5M8 362 aaPredicted RBP12.52□□□□□ -0.41
NEK4-201ENST00000233027 CLEC14AQ86T13 490 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 FRZBQ92765 325 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 LPAR4Q99677 370 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 NUDT22Q9BRQ3 303 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 INIPQ9NRY2 104 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 CITO14578 2027 aa12.52□□□□□ -0.41
NEK4-201ENST00000233027 SLC9B1P1A6NJY1 282 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 PRLHRP49683 370 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 CXADRP78310 365 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 ENTHD1Q8IYW4 607 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 OR56B2PQ8NGI1 322 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 ADOQ96SZ5 270 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 METTL17Q9H7H0 456 aaPredicted RBP12.51□□□□□ -0.41
NEK4-201ENST00000233027 MBLAC1A4D2B0 266 aaPredicted RBP12.51□□□□□ -0.41
NEK4-201ENST00000233027 A6NIZ1 184 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 PRKRAO75569 313 aaKnown RBP12.51□□□□□ -0.41
NEK4-201ENST00000233027 RAP1BP61224 184 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 RAP1AP62834 184 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 SERTAD2Q14140 314 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 PKDCCQ504Y2 493 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 STEAP3Q658P3 488 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 GPR139Q6DWJ6 353 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 FAM83HQ6ZRV2 1179 aaPredicted RBP12.51□□□□□ -0.41
NEK4-201ENST00000233027 PAQR9Q6ZVX9 377 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 ZNF681Q96N22 645 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 TSPAN10Q9H1Z9 355 aaPredicted RBP12.51□□□□□ -0.41
NEK4-201ENST00000233027 CSNK1G1Q9HCP0 422 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 H7C1C5 153 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 DNAJB6O75190 326 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 CHATP28329 748 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 XCR1P46094 333 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 IDH3GP51553 393 aaPredicted RBP12.51□□□□□ -0.41
NEK4-201ENST00000233027 TAS2R20P59543 309 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 LCN6P62502 163 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 FGL2Q14314 439 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 COX20Q5RI15 118 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 KCTD11Q693B1 232 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 TSSK4Q6SA08 328 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 NDUFAF7Q7L592 441 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 C12orf45Q8N5I9 185 aaPredicted RBP12.51□□□□□ -0.41
NEK4-201ENST00000233027 FNDC9Q8TBE3 224 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 TCTEX1D2Q8WW35 142 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 MALSU1Q96EH3 234 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 ZNF419Q96HQ0 510 aaPredicted RBP12.51□□□□□ -0.41
NEK4-201ENST00000233027 ZNF587Q96SQ5 575 aaPredicted RBP12.51□□□□□ -0.41
NEK4-201ENST00000233027 OLAHQ9NV23 265 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 PGAP2Q9UHJ9 254 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 CSO75390 466 aaKnown RBP12.51□□□□□ -0.41
NEK4-201ENST00000233027 HLA-AP01891 365 aaKnown RBP12.51□□□□□ -0.41
NEK4-201ENST00000233027 SNRNP70P08621 437 aaKnown RBP12.51□□□□□ -0.41
NEK4-201ENST00000233027 HOXB5P09067 269 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 MRPL2Q5T653 305 aaKnown RBP12.51□□□□□ -0.41
NEK4-201ENST00000233027 OR7E24Q6IFN5 339 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 GPR155Q7Z3F1 870 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 TCEAL8Q8IYN2 117 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 UNKLQ9H9P5 680 aaKnown RBP12.51□□□□□ -0.41
NEK4-201ENST00000233027 ARNT2Q9HBZ2 717 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 OSGIN1Q9UJX0 560 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 CBLCQ9ULV8 474 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 CA5BQ9Y2D0 317 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 AIFM1O95831 613 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 HIST1H1TP22492 207 aaPredicted RBP12.51□□□□□ -0.41
NEK4-201ENST00000233027 VASPP50552 380 aaPredicted RBP12.51□□□□□ -0.41
NEK4-201ENST00000233027 FOXK1P85037 733 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 CHRNEQ04844 493 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 BTN1A1Q13410 526 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 SLC9A3R2Q15599 337 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 AGAP7PQ5VUJ5 663 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 ALKAL2Q6UX46 152 aa12.51□□□□□ -0.41
NEK4-201ENST00000233027 ZNF583Q96ND8 569 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms