RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 UBDO15205 165 aa12.69□□□□□ -0.38
GPN3-201ENST00000228827 ATE1O95260 518 aa12.69□□□□□ -0.38
GPN3-201ENST00000228827 CHRM4P08173 479 aa12.69□□□□□ -0.38
GPN3-201ENST00000228827 PABPC4LP0CB38 370 aaKnown RBP12.69□□□□□ -0.38
GPN3-201ENST00000228827 ENPP1P22413 925 aa12.69□□□□□ -0.38
GPN3-201ENST00000228827 PCYT1AP49585 367 aa12.69□□□□□ -0.38
GPN3-201ENST00000228827 TMEM201Q5SNT2 666 aa12.69□□□□□ -0.38
GPN3-201ENST00000228827 C3orf33Q6P1S2 294 aa12.69□□□□□ -0.38
GPN3-201ENST00000228827 C22orf34Q6ZV56 151 aa12.69□□□□□ -0.38
GPN3-201ENST00000228827 NUFIP2Q7Z417 695 aaKnown RBP12.69□□□□□ -0.38
GPN3-201ENST00000228827 LSRQ86X29 649 aaPredicted RBP12.69□□□□□ -0.38
GPN3-201ENST00000228827 TUSC5Q8IXB3 177 aa12.69□□□□□ -0.38
GPN3-201ENST00000228827 OR9I1Q8NGQ6 314 aa12.69□□□□□ -0.38
GPN3-201ENST00000228827 ZNF563Q8TA94 476 aa12.69□□□□□ -0.38
GPN3-201ENST00000228827 ST8SIA1Q92185 356 aa12.69□□□□□ -0.38
GPN3-201ENST00000228827 DNAJA3Q96EY1 480 aa12.69□□□□□ -0.38
GPN3-201ENST00000228827 SAP130Q9H0E3 1048 aa12.69□□□□□ -0.38
GPN3-201ENST00000228827 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.69□□□□□ -0.38
GPN3-201ENST00000228827 SLC6A13Q9NSD5 602 aa12.69□□□□□ -0.38
GPN3-201ENST00000228827 ACER3Q9NUN7 267 aa12.69□□□□□ -0.38
GPN3-201ENST00000228827 SLC35A3Q9Y2D2 325 aa12.69□□□□□ -0.38
GPN3-201ENST00000228827 USH1CQ9Y6N9 552 aa12.69□□□□□ -0.38
GPN3-201ENST00000228827 ANKRD17O75179 2603 aaKnown RBP12.69□□□□□ -0.38
GPN3-201ENST00000228827 CCDC168Q8NDH2 2452 aa12.69□□□□□ -0.38
GPN3-201ENST00000228827 HRNRQ86YZ3 2850 aaPredicted RBP12.68□□□□□ -0.38
GPN3-201ENST00000228827 DEFB108AA8MXU0 73 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 ETV2O00321 342 aaPredicted RBP12.68□□□□□ -0.38
GPN3-201ENST00000228827 PRKD3O94806 890 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 ANP32DO95626 131 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 IL6P05231 212 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 GUSBP08236 651 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 NID1P14543 1247 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 KLK2P20151 261 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 CRYGSP22914 178 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 KCNJ10P78508 379 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 PLAURQ03405 335 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 LRRC74AQ0VAA2 488 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 RNPS1Q15287 305 aaKnown RBP12.68□□□□□ -0.38
GPN3-201ENST00000228827 GSTA3Q16772 222 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 GTDC1Q4AE62 458 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 TTMPQ5BVD1 217 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 STAC2Q6ZMT1 411 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 PLEKHM3Q6ZWE6 761 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 STK32CQ86UX6 486 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 FAM71CQ8NEG0 241 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 TMEM234Q8WY98 164 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 CNOT9Q92600 299 aaKnown RBP12.68□□□□□ -0.38
GPN3-201ENST00000228827 VPS33AQ96AX1 596 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 TRNT1Q96Q11 434 aaKnown RBP12.68□□□□□ -0.38
GPN3-201ENST00000228827 CXXC4Q9H2H0 198 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 SLC38A1Q9H2H9 487 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 SERINC1Q9NRX5 453 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 ZIM2Q9NZV7 527 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 KLHL13Q9P2N7 655 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 ANKHD1Q8IWZ3 2542 aaKnown RBP12.68□□□□□ -0.38
GPN3-201ENST00000228827 PCNX3Q9H6A9 2034 aa12.68□□□□□ -0.38
GPN3-201ENST00000228827 DNAJA2O60884 412 aa12.67□□□□□ -0.38
GPN3-201ENST00000228827 KRT75O95678 551 aa12.67□□□□□ -0.38
GPN3-201ENST00000228827 NR2F1P10589 423 aa12.67□□□□□ -0.38
GPN3-201ENST00000228827 ANXA11P50995 505 aaKnown RBP12.67□□□□□ -0.38
GPN3-201ENST00000228827 RAC3P60763 192 aa12.67□□□□□ -0.38
GPN3-201ENST00000228827 ALKBH2Q6NS38 261 aa12.67□□□□□ -0.38
GPN3-201ENST00000228827 EPGNQ6UW88 154 aa12.67□□□□□ -0.38
GPN3-201ENST00000228827 LRRC74BQ6ZQY2 392 aa12.67□□□□□ -0.38
GPN3-201ENST00000228827 BEND4Q6ZU67 534 aa12.67□□□□□ -0.38
GPN3-201ENST00000228827 MIER2Q8N344 545 aa12.67□□□□□ -0.38
GPN3-201ENST00000228827 ARFGAP2Q8N6H7 521 aa12.67□□□□□ -0.38
GPN3-201ENST00000228827 LRRC8CQ8TDW0 803 aa12.67□□□□□ -0.38
GPN3-201ENST00000228827 ZNF775Q96BV0 537 aaPredicted RBP12.67□□□□□ -0.38
GPN3-201ENST00000228827 ATP6V1G3Q96LB4 118 aa12.67□□□□□ -0.38
GPN3-201ENST00000228827 HS3ST6Q96QI5 342 aa12.67□□□□□ -0.38
GPN3-201ENST00000228827 SLCO1B3Q9NPD5 702 aa12.67□□□□□ -0.38
GPN3-201ENST00000228827 CTPS2Q9NRF8 586 aa12.67□□□□□ -0.38
GPN3-201ENST00000228827 SDR39U1Q9NRG7 319 aaPredicted RBP12.67□□□□□ -0.38
GPN3-201ENST00000228827 LIPT1Q9Y234 373 aa12.67□□□□□ -0.38
GPN3-201ENST00000228827 AP3D1O14617 1153 aa12.66□□□□□ -0.38
GPN3-201ENST00000228827 ADAM11O75078 769 aa12.66□□□□□ -0.38
GPN3-201ENST00000228827 THBDP07204 575 aa12.66□□□□□ -0.38
GPN3-201ENST00000228827 YES1P07947 543 aa12.66□□□□□ -0.38
GPN3-201ENST00000228827 TFPIP10646 304 aa12.66□□□□□ -0.38
GPN3-201ENST00000228827 ETFAP13804 333 aa12.66□□□□□ -0.38
GPN3-201ENST00000228827 CCNA2P20248 432 aa12.66□□□□□ -0.38
GPN3-201ENST00000228827 CRATP43155 626 aa12.66□□□□□ -0.38
GPN3-201ENST00000228827 IDH2P48735 452 aaKnown RBP12.66□□□□□ -0.38
GPN3-201ENST00000228827 POLR2JP52435 117 aaKnown RBP12.66□□□□□ -0.38
GPN3-201ENST00000228827 DEFB113Q30KQ7 82 aa12.66□□□□□ -0.38
GPN3-201ENST00000228827 C6orf10Q5SRN2 563 aa12.66□□□□□ -0.38
GPN3-201ENST00000228827 TFAP2EQ6VUC0 442 aa12.66□□□□□ -0.38
GPN3-201ENST00000228827 CXorf67Q86X51 503 aaPredicted RBP12.66□□□□□ -0.38
GPN3-201ENST00000228827 WDR60Q8WVS4 1066 aa12.66□□□□□ -0.38
GPN3-201ENST00000228827 OIT3Q8WWZ8 545 aa12.66□□□□□ -0.38
GPN3-201ENST00000228827 MBD6Q96DN6 1003 aa12.66□□□□□ -0.38
GPN3-201ENST00000228827 AURKBQ96GD4 344 aaPredicted RBP12.66□□□□□ -0.38
GPN3-201ENST00000228827 C7orf26Q96N11 449 aa12.66□□□□□ -0.38
GPN3-201ENST00000228827 ALPK1Q96QP1 1244 aa12.66□□□□□ -0.38
GPN3-201ENST00000228827 ACTR6Q9GZN1 396 aa12.66□□□□□ -0.38
GPN3-201ENST00000228827 RMND5AQ9H871 391 aa12.66□□□□□ -0.38
GPN3-201ENST00000228827 UBTD1Q9HAC8 227 aa12.66□□□□□ -0.38
GPN3-201ENST00000228827 FANCFQ9NPI8 374 aa12.66□□□□□ -0.38
GPN3-201ENST00000228827 MED12LQ86YW9 2145 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms