RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 D2HGDHQ8N465 521 aa17.6■□□□□ 0.41
YBX3-201ENST00000228251 KLHL36Q8N4N3 616 aa17.6■□□□□ 0.41
YBX3-201ENST00000228251 SLC37A3Q8NCC5 494 aa17.6■□□□□ 0.41
YBX3-201ENST00000228251 GALNT6Q8NCL4 622 aa17.6■□□□□ 0.41
YBX3-201ENST00000228251 FAM83FQ8NEG4 500 aaPredicted RBP17.6■□□□□ 0.41
YBX3-201ENST00000228251 RNF217Q8TC41 542 aa17.6■□□□□ 0.41
YBX3-201ENST00000228251 SNRNP27Q8WVK2 155 aaKnown RBP17.6■□□□□ 0.41
YBX3-201ENST00000228251 TMEM203Q969S6 136 aa17.6■□□□□ 0.41
YBX3-201ENST00000228251 SENP5Q96HI0 755 aaPredicted RBP17.6■□□□□ 0.41
YBX3-201ENST00000228251 TNFRSF13CQ96RJ3 184 aa17.6■□□□□ 0.41
YBX3-201ENST00000228251 LMF1Q96S06 567 aa17.6■□□□□ 0.41
YBX3-201ENST00000228251 KCNS3Q9BQ31 491 aa17.6■□□□□ 0.41
YBX3-201ENST00000228251 TBC1D17Q9HA65 648 aa17.6■□□□□ 0.41
YBX3-201ENST00000228251 SNTG1Q9NSN8 517 aa17.6■□□□□ 0.41
YBX3-201ENST00000228251 H2AFY2Q9P0M6 372 aaPredicted RBP17.6■□□□□ 0.41
YBX3-201ENST00000228251 SERTAD3Q9UJW9 196 aa17.6■□□□□ 0.41
YBX3-201ENST00000228251 TRAPPC4Q9Y296 219 aa17.6■□□□□ 0.41
YBX3-201ENST00000228251 PCDHGB6Q9Y5F9 930 aa17.6■□□□□ 0.41
YBX3-201ENST00000228251 MAU2Q9Y6X3 613 aa17.6■□□□□ 0.41
YBX3-201ENST00000228251 A0A087WUJ7 227 aa17.59■□□□□ 0.41
YBX3-201ENST00000228251 FAM86C2PA6NEL3 165 aa17.59■□□□□ 0.41
YBX3-201ENST00000228251 C17orf105B2RV13 164 aa17.59■□□□□ 0.41
YBX3-201ENST00000228251 TBX1O43435 398 aa17.59■□□□□ 0.41
YBX3-201ENST00000228251 BDH1Q02338 343 aa17.59■□□□□ 0.41
YBX3-201ENST00000228251 CDC20Q12834 499 aa17.59■□□□□ 0.41
YBX3-201ENST00000228251 ZNF791Q3KP31 576 aaPredicted RBP17.59■□□□□ 0.41
YBX3-201ENST00000228251 ZNF321PQ8N8H1 164 aa17.59■□□□□ 0.41
YBX3-201ENST00000228251 OR1L3Q8NH93 324 aa17.59■□□□□ 0.41
YBX3-201ENST00000228251 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.59■□□□□ 0.41
YBX3-201ENST00000228251 ASB15Q8WXK1 588 aa17.59■□□□□ 0.41
YBX3-201ENST00000228251 SLC41A2Q96JW4 573 aa17.59■□□□□ 0.41
YBX3-201ENST00000228251 TM9SF2Q99805 663 aa17.59■□□□□ 0.41
YBX3-201ENST00000228251 NEURL2Q9BR09 285 aa17.59■□□□□ 0.41
YBX3-201ENST00000228251 IFT27Q9BW83 186 aa17.59■□□□□ 0.41
YBX3-201ENST00000228251 ERVMER34-1Q9H9K5 563 aa17.59■□□□□ 0.41
YBX3-201ENST00000228251 PLEKHB1Q9UF11 243 aaPredicted RBP17.59■□□□□ 0.41
YBX3-201ENST00000228251 CAB39Q9Y376 341 aaPredicted RBP17.59■□□□□ 0.41
YBX3-201ENST00000228251 PNMA8CA0A1B0GUJ8 204 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 ZC3H12DA2A288 527 aaKnown RBP17.58■□□□□ 0.41
YBX3-201ENST00000228251 SOX1O00570 391 aaPredicted RBP17.58■□□□□ 0.41
YBX3-201ENST00000228251 SLC30A4O14863 429 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 SEC16AO15027 2179 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 BCAT2O15382 392 aaPredicted RBP17.58■□□□□ 0.41
YBX3-201ENST00000228251 CDRT1O95170 752 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 CSTAP01040 98 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 IFNA16P05015 189 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 PEPDP12955 493 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 NOS3P29474 1203 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 RANBP1P43487 201 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 PPICP45877 212 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 TGM4P49221 684 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 AFF3P51826 1226 aaKnown RBP17.58■□□□□ 0.41
YBX3-201ENST00000228251 DNASE1L3Q13609 305 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 SHBQ15464 509 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 CACNA1EQ15878 2313 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 TBC1D25Q3MII6 688 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 B3GLCTQ6Y288 498 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 TTLL10Q6ZVT0 673 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 SLC22A16Q86VW1 577 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 ACBD7Q8N6N7 88 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 TMEM99Q8N816 258 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 UNC13CQ8NB66 2214 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 OR51G2Q8NGK0 314 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 OR51A7Q8NH64 312 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 SPRYD4Q8WW59 207 aaPredicted RBP17.58■□□□□ 0.41
YBX3-201ENST00000228251 DCLRE1CQ96SD1 692 aaKnown RBP17.58■□□□□ 0.41
YBX3-201ENST00000228251 SP140LQ9H930 580 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 ABCB10Q9NRK6 738 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 HAO2Q9NYQ3 351 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 OR10H1Q9Y4A9 318 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 V9GYH0 126 aa17.58■□□□□ 0.41
YBX3-201ENST00000228251 RP1P56715 2156 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 MPDZO75970 2070 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 TMEM150CB9EJG8 249 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 AKAP8O43823 692 aaKnown RBP17.58■□□□□ 0.4
YBX3-201ENST00000228251 PPP1R3DO95685 299 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 IL33O95760 270 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 DDAH2O95865 285 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 CLEC2LP0C7M8 214 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 GLB1P16278 677 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 OR1D4P47884 311 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 GPR143P51810 404 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 PSPHP78330 225 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 RTL4Q6ZR62 310 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 PRSS42Q7Z5A4 293 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 OAFQ86UD1 273 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 ZFP41Q8N8Y5 198 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 SYT14Q8NB59 555 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 TSLPQ969D9 159 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 C3orf49Q96BT1 292 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 KCTD7Q96MP8 289 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 SLC46A1Q96NT5 459 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 TEAD3Q99594 435 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 COQ7Q99807 217 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 SLC30A2Q9BRI3 323 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 POLE4Q9NR33 117 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 ASB6Q9NWX5 421 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 CHRNA9Q9UGM1 479 aa17.58■□□□□ 0.4
YBX3-201ENST00000228251 SLC22A31A6NKX4 558 aa17.57■□□□□ 0.4
YBX3-201ENST00000228251 C12orf71A8MTZ7 269 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms